RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 ZNF23P17027 643 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 APLNRP35414 380 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 RPL4P36578 427 aaKnown RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 SLC9A3P48764 834 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 CHN2P52757 468 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 KLF3P57682 345 aaPredicted RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 PSME3P61289 254 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 RPL27P61353 136 aaKnown RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 FXNQ16595 210 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 HIST3H3Q16695 136 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 FGD3Q5JSP0 725 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 SPATA46Q5T0L3 261 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 C10orf128Q5T292 105 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 TBPL2Q6SJ96 375 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 CBLL1Q75N03 491 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 RRM2BQ7LG56 351 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 OAFQ86UD1 273 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 CYP4Z1Q86W10 505 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 ZNF786Q8N393 782 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 ZNF540Q8NDQ6 660 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 OR1J2Q8NGS2 313 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 OR1J1Q8NGS3 322 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 SNX33Q8WV41 574 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 LIPHQ8WWY8 451 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 GTF3AQ92664 365 aaKnown RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 HOPXQ9BPY8 73 aaPredicted RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 RERGLQ9H628 205 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 ADA2Q9NZK5 511 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 TAAR3PQ9P1P4 343 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 STX18Q9P2W9 335 aaKnown RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 FBXO9Q9UK97 447 aaPredicted RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 CDC42EP3Q9UKI2 254 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 ZNF346Q9UL40 294 aaKnown RBP7.44□□□□□ -1.22
RFX3-209ENST00000451859 HIF3AQ9Y2N7 669 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 AP3M1Q9Y2T2 418 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 UGT2A1Q9Y4X1 527 aa7.44□□□□□ -1.22
RFX3-209ENST00000451859 A0A087WUU8 490 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 TPD52L2O43399 206 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 CDC14BO60729 498 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 PTHP01270 115 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 IGHMP01871 453 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 MMP7P09237 267 aaPredicted RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 FAM157CP0CG43 387 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 COL8A2P25067 703 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 GIFP27352 417 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 LAP3P28838 519 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 MAGEB1P43366 347 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 GYS2P54840 703 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 SELENOVP59797 346 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 MRPS34P82930 218 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 SRSF2Q01130 221 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 PRKCDQ05655 676 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 ELFN2Q5R3F8 820 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 FAM120AOSQ5T036 256 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 OTPQ5XKR4 325 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 C8orf82Q6P1X6 216 aaPredicted RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 PODNL1Q6PEZ8 512 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 CXXC5Q7LFL8 322 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 CPLX4Q7Z7G2 160 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 DPPA2Q7Z7J5 298 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 FAM86B1Q8N7N1 296 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 FAM156AQ8NDB6 213 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 CPEB3Q8NE35 698 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 SYNPRQ8TBG9 265 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 ACOT11Q8WXI4 607 aaPredicted RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 C11orf40Q8WZ69 217 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 YIPF5Q969M3 257 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 NABP1Q96AH0 204 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 NMD3Q96D46 503 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 CMTM5Q96DZ9 223 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 FAM46AQ96IP4 442 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 RBP7Q96R05 134 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 SEPHS2Q99611 448 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 ALG12Q9BV10 488 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 NSRP1Q9H0G5 558 aaKnown RBP7.43□□□□□ -1.22
RFX3-209ENST00000451859 LRMDAQ9H2I8 198 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 MS4A5Q9H3V2 200 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 C1orf198Q9H425 327 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 SIAEQ9HAT2 523 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 EMC7Q9NPA0 242 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 IL20RAQ9UHF4 553 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 ADAM18Q9Y3Q7 739 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 ENPP4Q9Y6X5 453 aa7.43□□□□□ -1.22
RFX3-209ENST00000451859 TEX13CA0A0J9YWL9 993 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 SLC22A23A1A5C7 686 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 C5orf49A4QMS7 147 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 A6NIZ1 184 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 NPIPB13A6NJU9 1138 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 NPIPB4C9JG80 1138 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 CDC42EP2O14613 210 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 PHF1O43189 567 aaPredicted RBP7.42□□□□□ -1.22
RFX3-209ENST00000451859 PPIHO43447 177 aaKnown RBP7.42□□□□□ -1.22
RFX3-209ENST00000451859 MGRN1O60291 552 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 GMNNO75496 209 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 PRSS23O95084 383 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 IGF2P01344 180 aa7.42□□□□□ -1.22
RFX3-209ENST00000451859 H1F0P07305 194 aaKnown RBP7.42□□□□□ -1.22
RFX3-209ENST00000451859 TSPAN19P0C672 248 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms