RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GUCA1AP43080 201 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 KLF3P57682 345 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 RAP1BP61224 184 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 RAP1AP62834 184 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 KRR1Q13601 381 aaKnown RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 SEC23BQ15437 767 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 TAF11Q15544 211 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 THEM4Q5T1C6 240 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 FAM205BPQ63HN1 556 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 ZNF774Q6NX45 483 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 C16orf89Q6UX73 402 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 CYP2R1Q6VVX0 501 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 RNF113BQ8IZP6 322 aaKnown RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 PGAM4Q8N0Y7 254 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 ARIH2OSQ8N7S6 290 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 CPEB3Q8NE35 698 aaKnown RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 OR1J2Q8NGS2 313 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SYNPRQ8TBG9 265 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 UBASH3BQ8TF42 649 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SNX33Q8WV41 574 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NEU4Q8WWR8 484 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 NSMCE2Q96MF7 247 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 LRRC37BQ96QE4 947 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SOX7Q9BT81 388 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 ALG12Q9BV10 488 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 LRMDAQ9H2I8 198 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 C1orf198Q9H425 327 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SIAEQ9HAT2 523 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SMURF2Q9HAU4 748 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 MYOZ1Q9NP98 299 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 KRCC1Q9NPI7 259 aaPredicted RBP8.31□□□□□ -1.08
USP54-207ENST00000451492 NDUFAF4Q9P032 175 aa8.31□□□□□ -1.08
USP54-207ENST00000451492 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 CSPG4Q6UVK1 2322 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 LOC100289279A0A1B0GTE1 492 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 SLC22A23A1A5C7 686 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 UNC119BA6NIH7 251 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 NDUFB2O95178 105 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 GADD45GO95257 159 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 PPP1R3DO95685 299 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 GPANK1O95872 356 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 SCG5P05408 212 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 FABP3P05413 133 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 CD14P08571 375 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 MSR1P21757 451 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 RRM2P31350 389 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 MAGEB1P43366 347 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 CENPAP49450 140 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 GDI2P50395 445 aaKnown RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 ZNF133P52736 654 aaPredicted RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 UCP2P55851 309 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 CCL8P80075 99 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 PSG4Q00888 419 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 DBPQ10586 325 aaPredicted RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 CHRFAM7AQ494W8 412 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 SAMD4BQ5PRF9 694 aaKnown RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 UGT2A3Q6UWM9 527 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 THSD4Q6ZMP0 1018 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 RFPL4BQ6ZWI9 263 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 TMPRSS11FQ6ZWK6 438 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 ZNF771Q7L3S4 317 aaPredicted RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 DPPA2Q7Z7J5 298 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 ZNF101Q8IZC7 436 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 IPCEF1Q8WWN9 437 aaPredicted RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 MCUR1Q96AQ8 359 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 NMD3Q96D46 503 aaKnown RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 PYURFQ96I23 114 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 C7orf34Q96L11 122 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 ZNF416Q9BWM5 594 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 WNT5BQ9H1J7 359 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 ANKRD19PQ9H560 264 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 FBXO9Q9UK97 447 aaPredicted RBP8.3□□□□□ -1.08
USP54-207ENST00000451492 KCNS2Q9ULS6 477 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 POLR1DQ9Y2S0 133 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 IER3IP1Q9Y5U9 82 aa8.3□□□□□ -1.08
USP54-207ENST00000451492 NAV3Q8IVL0 2385 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 RTTNQ86VV8 2226 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 LOC100509620A0A075B734 347 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 A0A1W2PRQ8 180 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 HTR3EA5X5Y0 456 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 OR10H3O60404 316 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 DOK2O60496 412 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SLC16A7O60669 478 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 CDC14BO60729 498 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 MPZL1O95297 269 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SNAP29O95721 258 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 TGFAP01135 160 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SEMG1P04279 462 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 CST2P09228 141 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 HSD17B1P14061 328 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 CTLA4P16410 223 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ZNF23P17027 643 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ITGA2P17301 1181 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ATP6V1B2P21281 511 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 IGFBP5P24593 272 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms