RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 APLNRP35414 380 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 LIMS1P48059 325 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 MRPS11P82912 194 aaKnown RBP16.61■□□□□ 0.25
USP40-207ENST00000450940 PSG4Q00888 419 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 HSF2Q03933 536 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 MAD2L1BPQ15013 274 aaPredicted RBP16.61■□□□□ 0.25
USP40-207ENST00000450940 PIGWQ7Z7B1 504 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 FAM86B1Q8N7N1 296 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 SYNPRQ8TBG9 265 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 C11orf40Q8WZ69 217 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 FUZQ9BT04 418 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 CD300AQ9UGN4 299 aa16.61■□□□□ 0.25
USP40-207ENST00000450940 FAM32AQ9Y421 112 aaKnown RBP16.61■□□□□ 0.25
USP40-207ENST00000450940 LOC100509620A0A075B734 347 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 LYNX1G3V0Z9 82 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 CLPTM1O96005 669 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 HPXP02790 462 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 FAM157CP0CG43 387 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 LYNX1P0DP58 116 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 LAP3P28838 519 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 OMPP47874 163 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 CHN2P52757 468 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 KLF3P57682 345 aaPredicted RBP16.6■□□□□ 0.25
USP40-207ENST00000450940 SELENOVP59797 346 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 ERVK-25P63136 954 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 FAM166AQ6J272 317 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 SYT9Q86SS6 491 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 RNF148Q8N7C7 305 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 C1orf159Q96HA4 380 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 GPX7Q96SL4 187 aaPredicted RBP16.6■□□□□ 0.25
USP40-207ENST00000450940 WACQ9BTA9 647 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 OR2H1Q9GZK4 316 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 WNT5BQ9H1J7 359 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 SLCO1C1Q9NYB5 712 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 GRHPRQ9UBQ7 328 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 LPAR3Q9UBY5 353 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 GPR160Q9UJ42 338 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 SIGLEC7Q9Y286 467 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 ADAM18Q9Y3Q7 739 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 TIMM10BQ9Y5J6 103 aa16.6■□□□□ 0.25
USP40-207ENST00000450940 LOC100289279A0A1B0GTE1 492 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 A0A1W2PPW3 197 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 GMNNO75496 209 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 IFNA2P01563 188 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 IGHV3-13P01766 116 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 SEMG1P04279 462 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 LCKP06239 509 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 NAT2P11245 290 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 TCN1P20061 433 aaPredicted RBP16.59■□□□□ 0.25
USP40-207ENST00000450940 ACHEP22303 614 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 COL8A2P25067 703 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 RPL4P36578 427 aaKnown RBP16.59■□□□□ 0.25
USP40-207ENST00000450940 GUCA1AP43080 201 aaPredicted RBP16.59■□□□□ 0.25
USP40-207ENST00000450940 PCBD1P61457 104 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 ERVS71-1P61550 626 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 ENDOGQ14249 297 aaKnown RBP16.59■□□□□ 0.25
USP40-207ENST00000450940 MESTQ5EB52 335 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 PGAM4Q8N0Y7 254 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 AKR7LQ8NHP1 331 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 RDH5Q92781 318 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 FAM46AQ96IP4 442 aaKnown RBP16.59■□□□□ 0.25
USP40-207ENST00000450940 Q96M85 177 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 SOX7Q9BT81 388 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 CHODLQ9H9P2 273 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 NRIP3Q9NQ35 241 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 NKIRAS2Q9NYR9 191 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 TAAR3PQ9P1P4 343 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 ARL2BPQ9Y2Y0 163 aa16.59■□□□□ 0.25
USP40-207ENST00000450940 CUBNO60494 3623 aa16.58■□□□□ 0.25
USP40-207ENST00000450940 TRBV4-1A0A0J9YWV2 114 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 LRP5LA4QPB2 252 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 C17orf100A8MU93 164 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 NDUFB2O95178 105 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 SCG5P05408 212 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 MSR1P21757 451 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 IGFBP5P24593 272 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 WNT5AP41221 380 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 GYS2P54840 703 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 FXYD6P3P58550 94 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 SEC23BQ15437 767 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 MOGQ16653 247 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 NKPD1Q17RQ9 610 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 SAMD4BQ5PRF9 694 aaKnown RBP16.58■□□□□ 0.24
USP40-207ENST00000450940 ALDH16A1Q8IZ83 802 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 ZNF101Q8IZC7 436 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 OR1J1Q8NGS3 322 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 PYURFQ96I23 114 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 ZNF416Q9BWM5 594 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 BEX2Q9BXY8 128 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 NDEL1Q9GZM8 345 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 OR51B6Q9H340 312 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 HINT3Q9NQE9 182 aaKnown RBP16.58■□□□□ 0.24
USP40-207ENST00000450940 POLE4Q9NR33 117 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 TAGLN3Q9UI15 199 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 MAGEL2Q9UJ55 1249 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 KCNS2Q9ULS6 477 aa16.58■□□□□ 0.24
USP40-207ENST00000450940 PRSS37A4D1T9 235 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 C12orf71A8MTZ7 269 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 H7C1C5 153 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms