RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 FUBP1Q96AE4 644 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 MOB3AQ96BX8 217 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RPUSD4Q96CM3 377 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 PIK3IP1Q96FE7 263 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SLC35E1Q96K37 410 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 EGLN2Q96KS0 407 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 C4orf36Q96KX1 117 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CAPNS2Q96L46 248 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 BMFQ96LC9 184 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 LMF1Q96S06 567 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZIC5Q96T25 663 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 P2RX4Q99571 388 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MCHR1Q99705 422 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PDCD2LQ9BRP1 358 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MRIQ9BWK5 157 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TMEM191AQ9H0A3 160 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PELI2Q9HAT8 420 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SEBOXQ9HB31 216 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 SIDT1Q9NXL6 827 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 TESQ9UGI8 421 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 UBE2J1Q9Y385 318 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 PDE4DIPQ5VU43 2346 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 COL2A1P02458 1487 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 COL18A1P39060 1754 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 C2orf78A6NCI8 922 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 A6NLC8 198 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FIGNL2A6NMB9 653 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF724A8MTY0 619 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HIDE1A8MVS5 230 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FAM171A2A8MVW0 826 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SULT2B1O00204 365 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PLA2G10O15496 165 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SEMA7AO75326 666 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TXNDC12O95881 172 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MT-ND6P03923 174 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CSTBP04080 98 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 HSPB1P04792 205 aaKnown RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ITGB2P05107 769 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SERPINA7P05543 415 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 EPHX1P07099 455 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 CEBPBP17676 345 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KITLGP21583 273 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 AADACP22760 399 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FCGR2CP31995 323 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TRHRP34981 398 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 MMP16P51512 607 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 P2RX1P51575 399 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SUOXP51687 545 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 FAM3AP98173 230 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 BEX3Q00994 111 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HMGCS1Q01581 520 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 BAXQ07812 192 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 DOC2BQ14184 412 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SURF2Q15527 256 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 SLC5A12Q1EHB4 618 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 SYT14P1Q58G82 188 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PDZD11Q5EBL8 140 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ABHD15Q6UXT9 468 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MYPOPQ86VE0 399 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 VSIG10LQ86VR7 867 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 MON1AQ86VX9 555 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PRR22Q8IZ63 422 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 GPC2Q8N158 579 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 RCBTB1Q8NDN9 531 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 ZNF439Q8NDP4 499 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 STXBP6Q8NFX7 210 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR52R1Q8NGF1 315 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR52N4Q8NGI2 321 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR52I2Q8NH67 350 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TFAP2BQ92481 460 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 HOXB13Q92826 284 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 SFRP2Q96HF1 295 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 TMEM169Q96HH4 297 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 OR8B4Q96RC9 309 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 C19orf43Q9BQ61 176 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 NAA11Q9BSU3 229 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 ELL3Q9HB65 397 aaPredicted RBP2.03□□□□□ -2.08
USP53-202ENST00000450251 BTG4Q9NY30 223 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PLEK2Q9NYT0 353 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 PCOLCE2Q9UKZ9 415 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 KCNMB2Q9Y691 235 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 USP3Q9Y6I4 520 aa2.03□□□□□ -2.08
USP53-202ENST00000450251 IGKV6D-41A0A0C4DH26 115 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 CPSF4LA6NMK7 179 aaKnown RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ZNF727A8MUV8 499 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 PDHXO00330 501 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 NDUFB2O95178 105 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 DBHP09172 617 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 PRR35P0CG20 571 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 OR12D1P0DN82 309 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 ACP5P13686 325 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SNRPBP14678 240 aaKnown RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 KCNE1P15382 129 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SMPD1P17405 629 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SDC1P18827 310 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 SRMP19623 302 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 FPR2P25090 351 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 OTX1P32242 354 aaPredicted RBP2.03□□□□□ -2.09
USP53-202ENST00000450251 ACVR1BP36896 505 aa2.03□□□□□ -2.09
USP53-202ENST00000450251 RPL13AP40429 203 aaKnown RBP2.03□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms