RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ZMYND11Q15326 602 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 C1orf140Q5VVS0 124 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 TYW3Q6IPR3 259 aaKnown RBP10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 HMGN2P46Q86SG4 172 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 GALNT4Q8N4A0 578 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 PAQR4Q8N4S7 273 aaPredicted RBP10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 OR8J3Q8NGG0 315 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 OR5AK3PQ8NH89 298 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 GEMIN6Q8WXD5 167 aaKnown RBP10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 GTF2H4Q92759 462 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 MCUR1Q96AQ8 359 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 VPS33AQ96AX1 596 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 OR2M2Q96R28 347 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 SPATA9Q9BWV2 254 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 DPAGT1Q9H3H5 408 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 RYR2Q92736 4967 aa10.49□□□□□ -0.73
AC004540.1-204ENST00000449537 RNF103-CHMP3A0A140T963 221 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 FAAHO00519 579 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 AKAP8O43823 692 aaKnown RBP10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 GUSBP08236 651 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 ADH4P08319 380 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 SOAT1P35610 550 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TGFBR2P37173 567 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 LIPAP38571 399 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 MMP15P51511 669 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 FGF12P61328 243 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 NCALDP61601 193 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 EMX1Q04741 257 aaPredicted RBP10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 HNRNPA0Q13151 305 aaKnown RBP10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 CDK5R2Q13319 367 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 PMS2P3Q13401 168 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 NFYCQ13952 458 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 ATAD3BQ5T9A4 648 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 CARD17Q5XLA6 110 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 C6orf120Q7Z4R8 191 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 C20orf196Q8IYI0 205 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 CLECL1Q8IZS7 167 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TMEM123Q8N131 208 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 MIPOL1Q8TD10 442 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 LRTOMTQ8WZ04 291 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 SLC25A36Q96CQ1 311 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 PLEKHA8Q96JA3 519 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 HOPXQ9BPY8 73 aaPredicted RBP10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TRIM15Q9C019 465 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 C1orf21Q9H246 121 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TOR3AQ9H497 397 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 B3GAT2Q9NPZ5 323 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 ACOXLQ9NUZ1 547 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 FBLN5Q9UBX5 448 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 ZDHHC8Q9ULC8 765 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 U3KQK5 164 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TANC2Q9HCD6 1990 aa10.48□□□□□ -0.73
AC004540.1-204ENST00000449537 TRBV5-3A0A0A0MS03 114 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 ZSCAN5BA6NJL1 495 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 CEACAM18A8MTB9 384 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 EVPLLA8MZ36 301 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 GYG2O15488 501 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 PNMTP11086 282 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 HOXB9P17482 250 aaPredicted RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 CHI3L1P36222 383 aaPredicted RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 MDH2P40926 338 aaKnown RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 NUDT2P50583 147 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 PLAURQ03405 335 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF718Q3SXZ3 478 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 SLC35E4Q6ICL7 350 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 PGBD2Q6P3X8 592 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 SLC2A7Q6PXP3 512 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 FRRS1Q6ZNA5 592 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 ANKRD46Q86W74 232 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 SKA3Q8IX90 412 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 MUC20Q8N307 709 aaPredicted RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 ZNF283Q8N7M2 679 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 OR1J2Q8NGS2 313 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 OR1J1Q8NGS3 322 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 MFSD8Q8NHS3 518 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 FGFBP3Q8TAT2 258 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 XAGE5Q8WWM1 108 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 GATAD2BQ8WXI9 593 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 CFHR4Q92496 578 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 DACT3Q96B18 629 aaPredicted RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 RCN3Q96D15 328 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 LRR1Q96L50 414 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 CGREF1Q99674 301 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 FOXB1Q99853 325 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 SLC35A5Q9BS91 424 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 PCGF1Q9BSM1 259 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 PAIP1Q9H074 479 aaKnown RBP10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 CYSLTR2Q9NS75 346 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 B3GAT1Q9P2W7 334 aa10.47□□□□□ -0.73
AC004540.1-204ENST00000449537 WI2-2373I1.2A0A1W2PRP0 233 aa10.46□□□□□ -0.73
AC004540.1-204ENST00000449537 FBP2O00757 339 aa10.46□□□□□ -0.73
AC004540.1-204ENST00000449537 MGRN1O60291 552 aa10.46□□□□□ -0.73
AC004540.1-204ENST00000449537 AHSA1O95433 338 aa10.46□□□□□ -0.73
AC004540.1-204ENST00000449537 CD55P08174 381 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms