RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ZNF705GA8MUZ8 300 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 AKR7A3O95154 331 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 NSA2O95478 260 aaKnown RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 EPPINO95925 133 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 CTSAP10619 480 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 RPS21P63220 83 aaKnown RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 CNKSR3Q6P9H4 555 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 BAP18Q8IXM2 172 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 GALNT16Q8N428 558 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 FAM71CQ8NEG0 241 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 RGP1Q92546 391 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-204ENST00000449510 APOOQ9BUR5 198 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 SLC25A32Q9H2D1 315 aa11.29□□□□□ -0.6
UBE3B-204ENST00000449510 LOC100289279A0A1B0GTE1 492 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 OR5K3A6NET4 321 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 BHLHE40O14503 412 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ZP2Q05996 745 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 RASGEF1BQ0VAM2 473 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PMPCAQ10713 525 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PLA2G7Q13093 441 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 DUSP8Q13202 625 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 OR14A16Q8NHC5 309 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 HGDQ93099 445 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 CDC6Q99741 560 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 HEXA-AS1Q9H8Q6 139 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ESPL1Q14674 2120 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PLSCR5A0PG75 271 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 F5H5K5 113 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 LRP3O75074 770 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ADAP1O75689 374 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 GLSO94925 669 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ARG1P05089 322 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 CDKN2AP42771 156 aaKnown RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 OR1D4P47884 311 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 C21orf58P58505 322 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 BTG2P78543 158 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PPP1R1AQ13522 171 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 TGIF1Q15583 401 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ARHGAP11BQ3KRB8 267 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 SUMF1Q8NBK3 374 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 TOE1Q96GM8 510 aaKnown RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ZFP57Q9NU63 452 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 GREB1Q4ZG55 1949 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ANKRD20A5PA0PJZ0 165 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 SULT1B1O43704 296 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 GABRR1P24046 479 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PSMB6P28072 239 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 CLEC12BQ2HXU8 276 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 PLEKHN1Q494U1 663 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 FJX1Q86VR8 437 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 RCBTB1Q8NDN9 531 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 OR51T1Q8NGJ9 327 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 ATOH1Q92858 354 aaPredicted RBP11.28□□□□□ -0.6
UBE3B-204ENST00000449510 TGM7Q96PF1 710 aa11.28□□□□□ -0.6
UBE3B-204ENST00000449510 C17orf105B2RV13 164 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 H7C417 338 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 S100PP25815 95 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.6
UBE3B-204ENST00000449510 NCMAPQ5T1S8 102 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF776Q68DI1 518 aaPredicted RBP11.27□□□□□ -0.6
UBE3B-204ENST00000449510 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 MED25Q71SY5 747 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 CPEB2Q7Z5Q1 589 aaKnown RBP11.27□□□□□ -0.6
UBE3B-204ENST00000449510 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 OR11A1Q9GZK7 315 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 LHX9Q9NQ69 397 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 C2orf42Q9NWW7 574 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 MTFP1Q9UDX5 166 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 WDR81Q562E7 1941 aa11.27□□□□□ -0.6
UBE3B-204ENST00000449510 XRCC3O43542 346 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
UBE3B-204ENST00000449510 ARTNQ5T4W7 220 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 DPY19L2P2Q6ZN68 376 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 ANGPTL5Q86XS5 388 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 AVL9Q8NBF6 648 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 MFSD9Q8NBP5 474 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 OR4D6Q8NGJ1 314 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 GPR119Q8TDV5 335 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 FAM3CQ92520 227 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 SLC25A28Q96A46 364 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 ACAD8Q9UKU7 415 aa11.27□□□□□ -0.61
UBE3B-204ENST00000449510 B9D1Q9UPM9 204 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms