RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FCGR1BQ92637 280 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 ZNF837Q96EG3 531 aaPredicted RBP16.97■□□□□ 0.31
RPS28-202ENST00000449223 SFXN3Q9BWM7 321 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 MND1Q9BWT6 205 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 RBM24Q9BX46 236 aaKnown RBP16.97■□□□□ 0.31
RPS28-202ENST00000449223 ERGIC3Q9Y282 383 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 LSM2Q9Y333 95 aaKnown RBP16.97■□□□□ 0.31
RPS28-202ENST00000449223 A0A1W2PQL4 384 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 ZNF99A8MXY4 864 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 E9PLN8 166 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 ZNF593O00488 134 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 PHYHO14832 338 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 MPZL1O95297 269 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CGAP01215 116 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 SCG5P05408 212 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 TMIGD3P0DMS9 266 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 ALOX5APP20292 161 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 MSR1P21757 451 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 ZNF85Q03923 595 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 FOXF2Q12947 444 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CEACAM16Q2WEN9 425 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 FAM27BQ5VT28 67 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 DPY19L4Q7Z388 723 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 ZNF454Q8N9F8 522 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 NAXEQ8NCW5 288 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 OR6N2Q8NGY6 317 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 OR52N1Q8NH53 320 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 STARD4Q96DR4 205 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 FOXN4Q96NZ1 517 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 MYCBPQ99417 103 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 FOXB1Q99853 325 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 VKORC1Q9BQB6 163 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 VCX3AQ9NNX9 186 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 TMEM38BQ9NVV0 291 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CHCHD3Q9NX63 227 aaKnown RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 TAS2R16Q9NYV7 291 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CLEC2DQ9UHP7 191 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CYB5R1Q9UHQ9 305 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 CAB39Q9Y376 341 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 NCOA6Q14686 2063 aaPredicted RBP16.96■□□□□ 0.31
RPS28-202ENST00000449223 CFAP46Q8IYW2 2715 aa16.96■□□□□ 0.31
RPS28-202ENST00000449223 A0A1W2PPL8 197 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 DAPL1A0PJW8 107 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 IL18BPO95998 194 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 PTHP01270 115 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 CD8BP10966 210 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 PSKH1P11801 424 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 ZNF823P16415 610 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 CDAP32320 146 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 GUCA1AP43080 201 aaPredicted RBP16.96■□□□□ 0.3
RPS28-202ENST00000449223 SH3BGRP55822 239 aaPredicted RBP16.96■□□□□ 0.3
RPS28-202ENST00000449223 MEP1BQ16820 701 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 VWA1Q6PCB0 445 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 Q6ZT83 130 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 DMRTA2Q96SC8 542 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 C12orf49Q9H741 205 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 SIAEQ9HAT2 523 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 UPB1Q9UBR1 384 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 COPS3Q9UNS2 423 aa16.96■□□□□ 0.3
RPS28-202ENST00000449223 SMG1Q96Q15 3661 aaKnown RBP16.95■□□□□ 0.3
RPS28-202ENST00000449223 ZNF670-ZNF695F2Z2N8 137 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 MYL12BO14950 172 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 KRT33AO76009 404 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 MPGP29372 298 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 CA7P43166 264 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 MAP2K4P45985 399 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 RPL5P46777 297 aaKnown RBP16.95■□□□□ 0.3
RPS28-202ENST00000449223 CAPZA2P47755 286 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ALDH3B2P48448 385 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ACTA2P62736 377 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ACTG2P63267 376 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 SIRPAP78324 504 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ZNF684Q5T5D7 378 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 LHFPL3Q86UP9 236 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 SYS1Q8N2H4 156 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 CNEP1R1Q8N9A8 125 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ASB17Q8WXJ9 295 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 MUL1Q969V5 352 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 BOD1Q96IK1 185 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 WACQ9BTA9 647 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 ALG8Q9BVK2 526 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 SEC61A2Q9H9S3 476 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 PRSS50Q9UI38 385 aa16.95■□□□□ 0.3
RPS28-202ENST00000449223 TMCC2O75069 709 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 IGHV3-9P01782 118 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 CTSSP25774 331 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 WNT4P56705 351 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 EGR3Q06889 387 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 CDONQ4KMG0 1287 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 SYT6Q5T7P8 510 aaPredicted RBP16.94■□□□□ 0.3
RPS28-202ENST00000449223 C3P1Q6ZMU1 363 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 RHOUQ7L0Q8 258 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 SSX6Q7RTT6 188 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 ZNF367Q7RTV3 350 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 BTLAQ7Z6A9 289 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 KLHL36Q8N4N3 616 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 RFLNBQ8N5W9 214 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 OR10H5Q8NGA6 315 aa16.94■□□□□ 0.3
RPS28-202ENST00000449223 ST7LQ8TDW4 575 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms