RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
SHC1-210ENST00000448116 CDC40O60508 579 aaKnown RBP eCLIP11.65□□□□□ -0.54
SHC1-210ENST00000448116 ZNF432O94892 652 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 OR2A4O95047 310 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 AKAIN1P0CW23 69 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 ADAM8P78325 824 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 ZNF117Q03924 483 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 NKAIN2Q5VXU1 208 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 JAGN1Q8N5M9 183 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 KLHDC7BQ96G42 594 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 OR2A7Q96R45 310 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.54
SHC1-210ENST00000448116 CD207Q9UJ71 328 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TRBV5-7A0A0A0MS05 114 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TMEM150CB9EJG8 249 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
SHC1-210ENST00000448116 SCGB2B2Q4G0G5 96 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 STEAP1BQ6NZ63 245 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TSSK4Q6SA08 328 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TMEM205Q6UW68 189 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 BIVMQ86UB2 503 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 ADGRG3Q86Y34 549 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 PTPMT1Q8WUK0 201 aaPredicted RBP11.65□□□□□ -0.54
SHC1-210ENST00000448116 CMKLR1Q99788 373 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TBL1XR1Q9BZK7 514 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
SHC1-210ENST00000448116 TAS2R8Q9NYW2 309 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 MED11Q9P086 117 aa11.65□□□□□ -0.54
SHC1-210ENST00000448116 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 SSX5O60225 188 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 GMFBP60983 142 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 IGLV3-21P80748 117 aaPredicted RBP11.65□□□□□ -0.55
SHC1-210ENST00000448116 SPOCK1Q08629 439 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 ACKR1Q16570 336 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 GLYATL3Q5SZD4 288 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 SLC36A1Q7Z2H8 476 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 TCTN2Q96GX1 697 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 LRRC61Q9BV99 259 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 B9D1Q9UPM9 204 aa11.65□□□□□ -0.55
SHC1-210ENST00000448116 IGHV5-51A0A0C4DH38 117 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 MPZL1O95297 269 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 S100A6P06703 90 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 LPLP06858 475 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 DRD1P21728 446 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 RORAP35398 523 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 FNTBP49356 437 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 EPHA4P54764 986 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 SLC37A1P57057 533 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
SHC1-210ENST00000448116 EGR3Q06889 387 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 LRFN4Q6PJG9 635 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 LMX1AQ8TE12 382 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 OR11A1Q9GZK7 315 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 MFFQ9GZY8 342 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 SPEGQ15772 3267 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 RAB3DO95716 219 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 AMY2AP04746 511 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 GUSBP08236 651 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 NMBP08949 121 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 PPICP45877 212 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 SERTAD2Q14140 314 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 EIF2B1Q14232 305 aaKnown RBP11.64□□□□□ -0.55
SHC1-210ENST00000448116 B3GNTL1Q67FW5 361 aaPredicted RBP11.64□□□□□ -0.55
SHC1-210ENST00000448116 GSG1LQ6UXU4 331 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 PRSS42Q7Z5A4 293 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 ZSCAN1Q8NBB4 408 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 RELL2Q8NC24 303 aaPredicted RBP11.64□□□□□ -0.55
SHC1-210ENST00000448116 PNPLA2Q96AD5 504 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 OR8B4Q96RC9 309 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
SHC1-210ENST00000448116 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 TAS2R4Q9NYW5 299 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 PLCL2Q9UPR0 1127 aa11.64□□□□□ -0.55
SHC1-210ENST00000448116 CLPSP04118 112 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 GP1BBP13224 206 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
SHC1-210ENST00000448116 NKPD1Q17RQ9 610 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 Q3ZCU0 254 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 FNDC7Q5VTL7 733 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 SLC18B1Q6NT16 456 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 HDDC2Q7Z4H3 204 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 OR1J4Q8NGS1 313 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 SGK3Q96BR1 496 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 CKLFQ9UBR5 152 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 LOC100289279A0A1B0GTE1 492 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 TMEM272A0A1B0GTI8 110 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 SOX1O00570 391 aaPredicted RBP11.63□□□□□ -0.55
SHC1-210ENST00000448116 EIF1AYO14602 144 aaKnown RBP11.63□□□□□ -0.55
SHC1-210ENST00000448116 TXNDC12O95881 172 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 CD2P06729 351 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 ZNF28P17035 718 aa11.63□□□□□ -0.55
SHC1-210ENST00000448116 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms