RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 C9JQL5 133 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 C1QTNF3-AMACRE9PGA6 284 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 FGF17O60258 216 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ABHD16AO95870 558 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 DAOP14920 347 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ADH6P28332 368 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 DPY19L2P2Q6ZN68 376 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 LYG2Q86SG7 212 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 PAQR4Q8N4S7 273 aaPredicted RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 GVQW1Q8N7I0 195 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 TMEM52Q8NDY8 209 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 OR2L8Q8NGY9 312 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 OR51M1Q9H341 326 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 DNAJB12Q9NXW2 375 aaKnown RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 DCDC2BA2VCK2 349 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 POM121BA6NF01 834 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 UBE2CO00762 179 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 HEXAP06865 529 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ZNF14P17017 642 aaPredicted RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 ZBTB25P24278 435 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 CD80P33681 288 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 KIR3DL2P43630 455 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 SLC35D3Q5M8T2 416 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 SLC35D2Q76EJ3 337 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 PARGQ86W56 976 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 TMEM229BQ8NBD8 167 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 MFSD9Q8NBP5 474 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
VPS52-212ENST00000445902 C20orf24Q9BUV8 137 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 A0A0A6YYC8 382 aaPredicted RBP12.61□□□□□ -0.39
VPS52-212ENST00000445902 C9orf170A2RU37 121 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 A6NLC8 198 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 I3L1I5 382 aaPredicted RBP12.61□□□□□ -0.39
VPS52-212ENST00000445902 P2RX6O15547 441 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 FAM157CP0CG43 387 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 SERPINF1P36955 418 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
VPS52-212ENST00000445902 TSC22D1Q15714 1073 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 WDR38Q5JTN6 314 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 GLYATL3Q5SZD4 288 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 LPCAT3Q6P1A2 487 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 ZNF585AQ6P3V2 769 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 CDRT4Q8N9R6 151 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 ZSCAN4Q8NAM6 433 aaPredicted RBP12.61□□□□□ -0.39
VPS52-212ENST00000445902 OR5T3Q8NGG3 340 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 CMBLQ96DG6 245 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 CMKLR1Q99788 373 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 TRBV23OR9-2A0A075B6M9 112 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 CLN5O75503 358 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 HTR3BO95264 441 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 NME2P22392 152 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 CD1CP29017 333 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 ASPHD2Q6ICH7 369 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
VPS52-212ENST00000445902 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 AKR1E2Q96JD6 320 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 PHB2Q99623 299 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 TMEM100Q9NV29 134 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
VPS52-212ENST00000445902 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 A0A1W2PR64 198 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 RNASEK-C17orf49H0YIS7 233 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PQBP1O60828 265 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 IGHV2-70P01814 119 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SERPINA5P05154 406 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 ERCC1P07992 297 aaPredicted RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 S100PP25815 95 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PSMB6P28072 239 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 RBM34P42696 430 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 OR2B8PP59922 312 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 ELOCQ15369 112 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 EXOSC6Q5RKV6 272 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 ZNF584Q8IVC4 421 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 ZNF595Q8IYB9 648 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 GATSQ8NAP1 163 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MRGPRFQ96AM1 343 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PAPOLGQ9BWT3 736 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 TRIM2Q9C040 744 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 SYT4Q9H2B2 425 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SMCO4Q9NRQ5 59 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 CYTL1Q9NRR1 136 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 DUSP22Q9NRW4 184 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 MRPS2Q9Y399 296 aaKnown RBP12.6□□□□□ -0.39
VPS52-212ENST00000445902 INSL6Q9Y581 213 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 SLC17A2O00624 439 aa12.6□□□□□ -0.39
VPS52-212ENST00000445902 LY86O95711 162 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms