RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 FOXL2P58012 376 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 ZNF417Q8TAU3 575 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 ELSPBP1Q96BH3 223 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 HIF3AQ9Y2N7 669 aa12.84□□□□□ -0.35
ERCC3-203ENST00000445889 NOP16Q9Y3C1 178 aaKnown RBP12.84□□□□□ -0.35
ERCC3-203ENST00000445889 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 RFPL4AA6NLU0 287 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 RFPL4AL1F8VTS6 287 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 SLC16A7O60669 478 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 AVPR2P30518 371 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 STK11Q15831 433 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 RAB11BQ15907 218 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 PRAMEF17Q5VTA0 474 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 OR52W1Q6IF63 320 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
ERCC3-203ENST00000445889 MCATQ8IVS2 390 aaKnown RBP12.83□□□□□ -0.36
ERCC3-203ENST00000445889 GVQW1Q8N7I0 195 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 CASTOR1Q8WTX7 329 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 C4orf45Q96LM5 186 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 MRI1Q9BV20 369 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 POLE3Q9NRF9 147 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 TAS2R8Q9NYW2 309 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 B4DGG1 531 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 HCRTR2O43614 444 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 ZNF254O75437 659 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 RPA2P15927 270 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
ERCC3-203ENST00000445889 C3orf33Q6P1S2 294 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 MCHR2Q969V1 340 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 SEH1LQ96EE3 360 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 NXF5Q9H1B4 397 aaKnown RBP12.83□□□□□ -0.36
ERCC3-203ENST00000445889 ATXN7L1Q9ULK2 861 aaPredicted RBP12.83□□□□□ -0.36
ERCC3-203ENST00000445889 CLDN16Q9Y5I7 305 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 VPS13AQ96RL7 3174 aa12.83□□□□□ -0.36
ERCC3-203ENST00000445889 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 LOC101059948A0A1B0GTJ6 334 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 EIF2B5Q13144 721 aaKnown RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 KLHL26Q53HC5 615 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 ZNF595Q8IYB9 648 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 FREM3P0C091 2139 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 AQP8O94778 261 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 OR6A2O95222 327 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 F12P00748 615 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 ASAH2BP0C7U1 165 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 CSF2RBP32927 897 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 RPL35P42766 123 aaKnown RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 CAPZA1P52907 286 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 ATP1B3P54709 279 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 OR7A5Q15622 319 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 OOSP2Q86WS3 158 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 SLC22A18ASQ8N1D0 253 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 MRGPRX1Q96LB2 322 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 MAP3K3Q99759 626 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 SLC6A7Q99884 636 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 VRK1Q99986 396 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 FBXO9Q9UK97 447 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 PCOLCE2Q9UKZ9 415 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 GPR31O00270 319 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 HHEXQ03014 270 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 DHRS2Q13268 280 aa12.82□□□□□ -0.36
ERCC3-203ENST00000445889 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
ERCC3-203ENST00000445889 RP1P56715 2156 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 MED12Q93074 2177 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 LOC100289279A0A1B0GTE1 492 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 C2orf72A6NCS6 295 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 C17orf105B2RV13 164 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
ERCC3-203ENST00000445889 RENP00797 406 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 RNH1P13489 461 aaKnown RBP12.81□□□□□ -0.36
ERCC3-203ENST00000445889 SKP1P63208 163 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 BIKQ13323 160 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 PDSS1Q5T2R2 415 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 ATPAF1Q5TC12 328 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-203ENST00000445889 TMEM184AQ6ZMB5 413 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 LINC00346Q8IVM7 164 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 BPIFB2Q8N4F0 458 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 PELOQ9BRX2 385 aaKnown RBP12.81□□□□□ -0.36
ERCC3-203ENST00000445889 OR11A1Q9GZK7 315 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 FANCMQ8IYD8 2048 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 SCDO00767 359 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 MGMTP16455 207 aa12.81□□□□□ -0.36
ERCC3-203ENST00000445889 HNRNPA2B1P22626 353 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms