RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 IGLV1-36A0A0B4J1U3 117 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 TVP23AA6NH52 213 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 ZNF99A8MXY4 864 aaPredicted RBP15.09■□□□□ 0.01
LIME1-202ENST00000444951 RPL36A-HNRNPH2H7BZ11 118 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 MPZL1O95297 269 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 GUCA1AP43080 201 aaPredicted RBP15.09■□□□□ 0.01
LIME1-202ENST00000444951 HSPA13P48723 471 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 SLC25A1P53007 311 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 TGFBR3Q03167 851 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 APOFQ13790 326 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 STK11Q15831 433 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 HIKESHIQ53FT3 197 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 C10orf128Q5T292 105 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 SFRP5Q5T4F7 317 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 ZNF691Q5VV52 312 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 B3GLCTQ6Y288 498 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 STAC2Q6ZMT1 411 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 OR8J1Q8NGP2 316 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 LRRC46Q96FV0 321 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 ZNF184Q99676 751 aaPredicted RBP15.09■□□□□ 0.01
LIME1-202ENST00000444951 FOXB1Q99853 325 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 NMNAT2Q9BZQ4 307 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 ELOVL5Q9NYP7 299 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 KCNN3Q9UGI6 736 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 UGT2A1Q9Y4X1 527 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 MAP1AP78559 2803 aaPredicted RBP15.08■□□□□ 0.01
LIME1-202ENST00000444951 A0A1W2PR80 420 aa15.08■□□□□ 0
LIME1-202ENST00000444951 SH3D21A4FU49 640 aa15.08■□□□□ 0
LIME1-202ENST00000444951 COX5AP20674 150 aa15.08■□□□□ 0
LIME1-202ENST00000444951 LAP3P28838 519 aa15.08■□□□□ 0
LIME1-202ENST00000444951 CAPZA2P47755 286 aa15.08■□□□□ 0
LIME1-202ENST00000444951 ZNF133P52736 654 aaPredicted RBP15.08■□□□□ 0
LIME1-202ENST00000444951 EFNB1P98172 346 aa15.08■□□□□ 0
LIME1-202ENST00000444951 MEP1BQ16820 701 aa15.08■□□□□ 0
LIME1-202ENST00000444951 LYPD4Q6UWN0 246 aa15.08■□□□□ 0
LIME1-202ENST00000444951 ZBTB46Q86UZ6 589 aa15.08■□□□□ 0
LIME1-202ENST00000444951 GLB1L2Q8IW92 636 aa15.08■□□□□ 0
LIME1-202ENST00000444951 C8orf59Q8N0T1 100 aaPredicted RBP15.08■□□□□ 0
LIME1-202ENST00000444951 LRRC18Q8N456 261 aa15.08■□□□□ 0
LIME1-202ENST00000444951 SETD9Q8NE22 299 aa15.08■□□□□ 0
LIME1-202ENST00000444951 OR1K1Q8NGR3 316 aa15.08■□□□□ 0
LIME1-202ENST00000444951 RNASE6Q93091 150 aaKnown RBP15.08■□□□□ 0
LIME1-202ENST00000444951 ZMYND19Q96E35 227 aaPredicted RBP15.08■□□□□ 0
LIME1-202ENST00000444951 SH3GL3Q99963 347 aa15.08■□□□□ 0
LIME1-202ENST00000444951 EMC7Q9NPA0 242 aa15.08■□□□□ 0
LIME1-202ENST00000444951 TMEM38BQ9NVV0 291 aa15.08■□□□□ 0
LIME1-202ENST00000444951 C16orf97H3BN30 126 aa15.07■□□□□ 0
LIME1-202ENST00000444951 ENTPD6O75354 484 aa15.07■□□□□ 0
LIME1-202ENST00000444951 SCG5P05408 212 aa15.07■□□□□ 0
LIME1-202ENST00000444951 UGT2B10P36537 528 aa15.07■□□□□ 0
LIME1-202ENST00000444951 SH3BGRP55822 239 aaPredicted RBP15.07■□□□□ 0
LIME1-202ENST00000444951 SNRPGP62308 76 aaKnown RBP15.07■□□□□ 0
LIME1-202ENST00000444951 TUBA1BP68363 451 aa15.07■□□□□ 0
LIME1-202ENST00000444951 TUBA4AP68366 448 aa15.07■□□□□ 0
LIME1-202ENST00000444951 GABRA6Q16445 453 aa15.07■□□□□ 0
LIME1-202ENST00000444951 ANKRD16Q6P6B7 361 aa15.07■□□□□ 0
LIME1-202ENST00000444951 TUBA1AQ71U36 451 aa15.07■□□□□ 0
LIME1-202ENST00000444951 SLC22A24Q8N4F4 322 aa15.07■□□□□ 0
LIME1-202ENST00000444951 ZNF511Q8NB15 262 aa15.07■□□□□ 0
LIME1-202ENST00000444951 CNIH3Q8TBE1 160 aa15.07■□□□□ 0
LIME1-202ENST00000444951 TRUB1Q8WWH5 349 aaKnown RBP15.07■□□□□ 0
LIME1-202ENST00000444951 S100PBPQ96BU1 408 aa15.07■□□□□ 0
LIME1-202ENST00000444951 CNBD2Q96M20 576 aa15.07■□□□□ 0
LIME1-202ENST00000444951 ZNF582Q96NG8 517 aaPredicted RBP15.07■□□□□ 0
LIME1-202ENST00000444951 RACGAP1Q9H0H5 632 aa15.07■□□□□ 0
LIME1-202ENST00000444951 CLN6Q9NWW5 311 aa15.07■□□□□ 0
LIME1-202ENST00000444951 MPZL2O60487 215 aa15.06■□□□□ 0
LIME1-202ENST00000444951 GLCEO94923 617 aa15.06■□□□□ 0
LIME1-202ENST00000444951 PSMB1P20618 241 aaKnown RBP15.06■□□□□ 0
LIME1-202ENST00000444951 HOXC12P31275 282 aa15.06■□□□□ 0
LIME1-202ENST00000444951 FMO3P31513 532 aa15.06■□□□□ 0
LIME1-202ENST00000444951 ART1P52961 327 aa15.06■□□□□ 0
LIME1-202ENST00000444951 NUDT6P53370 316 aa15.06■□□□□ 0
LIME1-202ENST00000444951 CDH11P55287 796 aa15.06■□□□□ 0
LIME1-202ENST00000444951 GLO1Q04760 184 aa15.06■□□□□ 0
LIME1-202ENST00000444951 IL18R1Q13478 541 aa15.06■□□□□ 0
LIME1-202ENST00000444951 MAD2L1BPQ15013 274 aaPredicted RBP15.06■□□□□ 0
LIME1-202ENST00000444951 TBRG1Q3YBR2 411 aa15.06■□□□□ 0
LIME1-202ENST00000444951 AADACL4Q5VUY2 407 aa15.06■□□□□ 0
LIME1-202ENST00000444951 NXNL2Q5VZ03 156 aa15.06■□□□□ 0
LIME1-202ENST00000444951 UGT2A3Q6UWM9 527 aa15.06■□□□□ 0
LIME1-202ENST00000444951 MEPCEQ7L2J0 689 aaKnown RBP15.06■□□□□ 0
LIME1-202ENST00000444951 OR10H5Q8NGA6 315 aa15.06■□□□□ 0
LIME1-202ENST00000444951 OR52N5Q8NH56 324 aa15.06■□□□□ 0
LIME1-202ENST00000444951 RHOXF1Q8NHV9 184 aa15.06■□□□□ 0
LIME1-202ENST00000444951 C11orf40Q8WZ69 217 aa15.06■□□□□ 0
LIME1-202ENST00000444951 BCL2L2Q92843 193 aaPredicted RBP15.06■□□□□ 0
LIME1-202ENST00000444951 HDHD5Q9BXW7 423 aa15.06■□□□□ 0
LIME1-202ENST00000444951 ACTR6Q9GZN1 396 aa15.06■□□□□ 0
LIME1-202ENST00000444951 LIME1Q9H400 295 aa15.06■□□□□ 0
LIME1-202ENST00000444951 POLE4Q9NR33 117 aa15.06■□□□□ 0
LIME1-202ENST00000444951 POLR1DQ9Y2S0 133 aa15.06■□□□□ 0
LIME1-202ENST00000444951 CCDC182A6NF36 153 aa15.05■□□□□ -0
LIME1-202ENST00000444951 PRODHO43272 600 aa15.05■□□□□ -0
LIME1-202ENST00000444951 FARS2O95363 451 aaKnown RBP15.05■□□□□ -0
LIME1-202ENST00000444951 TFP02787 698 aa15.05■□□□□ -0
LIME1-202ENST00000444951 MRPL3P09001 348 aaKnown RBP15.05■□□□□ -0
LIME1-202ENST00000444951 PATE4P0C8F1 98 aa15.05■□□□□ -0
LIME1-202ENST00000444951 OR8G3PP0DMU2 310 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms