RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SYT9Q86SS6 491 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 IQCF1Q8N6M8 205 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 CYB561A3Q8NBI2 242 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 SLC37A3Q8NCC5 494 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 NPEPL1Q8NDH3 523 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 OR2AJ1Q8NGZ0 328 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 OR4Q3Q8NH05 313 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 RIBC2Q9H4K1 309 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 SLC25A19Q9HC21 320 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 CRNNQ9UBG3 495 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-208ENST00000444533 B9D1Q9UPM9 204 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 ATP23Q9Y6H3 246 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 IGKV1D-43A0A0B4J1Z2 117 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 IGHV1-18A0A0C4DH31 117 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 TP53P04637 393 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-208ENST00000444533 SERPINA5P05154 406 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 CECR9P0C854 216 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 FMO3P31513 532 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 ALDH3A2P51648 485 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 SLC25A1P53007 311 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 CDH11P55287 796 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 AQP6Q13520 282 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 DAG1Q14118 895 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 KEAP1Q14145 624 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 CRMP1Q14194 572 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 PTGES3Q15185 160 aaKnown RBP12.28□□□□□ -0.44
SSBP3-208ENST00000444533 ETFDHQ16134 617 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 SEZ6L2Q6UXD5 910 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 FOXL2NBQ6ZUU3 175 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-208ENST00000444533 ZBTB46Q86UZ6 589 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 OR6V1Q8N148 313 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 OR6K6Q8NGW6 343 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 AKAP1Q92667 903 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSBP3-208ENST00000444533 FBXW5Q969U6 566 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 TSSK2Q96PF2 358 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 VCXQ9H320 206 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 DCLRE1BQ9H816 532 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 CDH20Q9HBT6 801 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 TVP23BQ9NYZ1 205 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 H2AFY2Q9P0M6 372 aaPredicted RBP12.28□□□□□ -0.44
SSBP3-208ENST00000444533 KCNG2Q9UJ96 466 aa12.28□□□□□ -0.44
SSBP3-208ENST00000444533 EI24O14681 340 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 HS3ST1O14792 307 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 SURF4O15260 269 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 SIAH2O43255 324 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 IGLV1-44P01699 117 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 ANPEPP15144 967 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 DNASE1P24855 282 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 CDC42P60953 191 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.45
SSBP3-208ENST00000444533 PPP2R2BQ00005 443 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 NAAAQ02083 359 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 RAB39AQ14964 217 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF672Q499Z4 452 aaPredicted RBP12.27□□□□□ -0.45
SSBP3-208ENST00000444533 ARL9Q6T311 187 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 CBR4Q8N4T8 237 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 SLC30A7Q8NEW0 376 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 HTRA1Q92743 480 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 LURAP1Q96LR2 239 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 TMEM204Q9BSN7 226 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF416Q9BWM5 594 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 FN3KQ9H479 309 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 USE1Q9NZ43 259 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
SSBP3-208ENST00000444533 EIF3KQ9UBQ5 218 aaKnown RBP12.27□□□□□ -0.45
SSBP3-208ENST00000444533 MOKQ9UQ07 419 aa12.27□□□□□ -0.45
SSBP3-208ENST00000444533 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 MITFO75030 526 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-208ENST00000444533 ALPLP05186 524 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 PATE4P0C8F1 98 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 BMP4P12644 408 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF32P17041 273 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 GDI2P50395 445 aaKnown RBP12.26□□□□□ -0.45
SSBP3-208ENST00000444533 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
SSBP3-208ENST00000444533 ADAM8P78325 824 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 TEKQ02763 1124 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 TRIP10Q15642 601 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 KLHL12Q53G59 568 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 PABPC1L2AQ5JQF8 200 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 TMEM236Q5W0B7 351 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 ACSM5Q6NUN0 579 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 FBXL14Q8N1E6 418 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 KBTBD8Q8NFY9 601 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 OR9Q1Q8NGQ5 310 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 C11orf40Q8WZ69 217 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 GABARAPL3Q9BY60 117 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 OR51V1Q9H2C8 321 aa12.26□□□□□ -0.45
SSBP3-208ENST00000444533 EMC7Q9NPA0 242 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms