RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RAP1BP61224 184 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 RPL27P61353 136 aaKnown RBP10.06□□□□□ -0.8
TTC28-203ENST00000442232 RAP1AP62834 184 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 MVKQ03426 396 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 FMODQ06828 376 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.8
TTC28-203ENST00000442232 TRAM2Q15035 370 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 TSTQ16762 297 aaKnown RBP10.06□□□□□ -0.8
TTC28-203ENST00000442232 ZMAT1Q5H9K5 638 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 THEM4Q5T1C6 240 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 USP51Q70EK9 711 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 MICU2Q8IYU8 434 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 LIPHQ8WWY8 451 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 HDAC2Q92769 488 aaKnown RBP10.06□□□□□ -0.8
TTC28-203ENST00000442232 RAB1CQ92928 201 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 BPIFA2Q96DR5 249 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ZNF583Q96ND8 569 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 LRRC37BQ96QE4 947 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 FNDC11Q9BVV2 318 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 EGLN1Q9GZT9 426 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 ELOVL3Q9HB03 270 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 SAR1AQ9NR31 198 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 CYSLTR2Q9NS75 346 aa10.06□□□□□ -0.8
TTC28-203ENST00000442232 CGGBP1Q9UFW8 167 aaPredicted RBP10.06□□□□□ -0.8
TTC28-203ENST00000442232 A0A0A6YYJ9 748 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 LOC100653049A0A140TA62 436 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 H3BSA7 217 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 SLC22A2O15244 555 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 RP2O75695 350 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 KRT34O76011 436 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ZNF682O95780 498 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 PNPP00491 289 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 IGHV3-13P01766 116 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 CST2P09228 141 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 TSPAN19P0C672 248 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 H2AFXP16104 143 aaPredicted RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 CTXN1P60606 82 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ERVK-25P63136 954 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 SELENOWP63302 87 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 SLC3A1Q07837 685 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ANKDD1AQ495B1 522 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 SPATA46Q5T0L3 261 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 AVPI1Q5T686 147 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 FAHD2BQ6P2I3 314 aaPredicted RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 RRM2BQ7LG56 351 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ZER1Q7Z7L7 766 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 PEG10Q86TG7 708 aaKnown RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 OAFQ86UD1 273 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 CYP4Z1Q86W10 505 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 OFCC1Q8IZS5 231 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 AKR7LQ8NHP1 331 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 ZNF418Q8TF45 676 aaPredicted RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 IPCEF1Q8WWN9 437 aaPredicted RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 GEMIN6Q8WXD5 167 aaKnown RBP10.05□□□□□ -0.8
TTC28-203ENST00000442232 NABP1Q96AH0 204 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 FAHD2AQ96GK7 314 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 TSPAN32Q96QS1 320 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 RACGAP1Q9H0H5 632 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 UGT2A1Q9Y4X1 527 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 TIMM10BQ9Y5J6 103 aa10.05□□□□□ -0.8
TTC28-203ENST00000442232 A0A0G2JMP0 313 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 A0A0X1KG70 313 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 ISPDA4D126 451 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 C12orf71A8MTZ7 269 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 XKRYO14609 159 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 SPRY3O43610 288 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 MPZL1O95297 269 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 IGHMP01871 453 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 MSR1P21757 451 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 LAP3P28838 519 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 RPL4P36578 427 aaKnown RBP10.04□□□□□ -0.8
TTC28-203ENST00000442232 LIPAP38571 399 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 SLC9A3P48764 834 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 LMO4P61968 165 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 PPP1CBP62140 327 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 FAM27BQ5VT28 67 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 FKBP9P1Q75LS8 142 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 IGFN1Q86VF2 1251 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 NRMQ8IXM6 262 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 OR4M2Q8NGB6 313 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 OR51A7Q8NH64 312 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 ABHD4Q8TB40 342 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 RCN3Q96D15 328 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 POM121L2Q96KW2 1035 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 DIRC2Q96SL1 478 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 OR2H1Q9GZK4 316 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 GRHPRQ9UBQ7 328 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 NDRG4Q9ULP0 352 aaKnown RBP10.04□□□□□ -0.8
TTC28-203ENST00000442232 A4GNTQ9UNA3 340 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 TANC2Q9HCD6 1990 aa10.04□□□□□ -0.8
TTC28-203ENST00000442232 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms