RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZSWIM7Q19AV6 140 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PGGHGQ32M88 737 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SYT14P1Q58G82 188 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF542PQ5EBM4 170 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CLEC12AQ5QGZ9 265 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 DCST2Q5T1A1 773 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCNJQ5T5M9 372 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 AADACL4Q5VUY2 407 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RPL13AP3Q6NVV1 102 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PAQR6Q6TCH4 344 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PLEKHG7Q6ZR37 379 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCDC190Q86UF4 302 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC22A16Q86VW1 577 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PARGQ86W56 976 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 MEX3DQ86XN8 651 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 GKN2Q86XP6 184 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SFTPA2Q8IWL1 248 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 NRMQ8IXM6 262 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CLDN22Q8N7P3 220 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TSTD1Q8NFU3 115 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR2T33Q8NG76 320 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR5T3Q8NGG3 340 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR8D4Q8NGM9 314 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 DOK4Q8TEW6 326 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM255BQ8WV15 326 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PATE1Q8WXA2 126 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ANKRD9Q96BM1 317 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RBM18Q96H35 190 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CEP19Q96LK0 163 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SAMD8Q96LT4 415 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 HARBI1Q96MB7 349 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 INTS14Q96SY0 518 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNS3Q9BQ31 491 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRSS27Q9BQR3 290 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF559Q9BR84 538 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PCGF1Q9BSM1 259 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 LMF2Q9BU23 707 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNN2Q9H2S1 579 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TCEAL2Q9H3H9 227 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SP140LQ9H930 580 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM27Q9HBJ8 222 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ABCB10Q9NRK6 738 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CYSLTR2Q9NS75 346 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 STARD5Q9NSY2 213 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 C14orf105Q9NVL8 296 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 NDUFB11Q9NX14 153 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 IL20Q9NYY1 176 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CISD1Q9NZ45 108 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAT2BQ9NZL9 334 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CNIH4Q9P003 139 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 IL17BQ9UHF5 180 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ERRFI1Q9UJM3 462 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 POMT2Q9UKY4 750 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC7A7Q9UM01 511 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 NDRG2Q9UN36 371 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRPS33Q9Y291 106 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 EXOGQ9Y2C4 368 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 NTNG1Q9Y2I2 539 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPIN1Q9Y657 262 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 MTCH2Q9Y6C9 303 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDH10Q9Y6N8 788 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ALPK3Q96L96 1907 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 C2orf16Q68DN1 1984 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ANKRD12Q6UB98 2062 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A0A6YYC8 382 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRDV1A0A1B0GX56 115 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CPED1A4D0V7 1026 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM8BA6NDV4 472 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ANXA2P2A6NMY6 339 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 I3L1I5 382 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 WWP2O00308 870 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CLDN4O14493 209 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC30A4O14863 429 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RGS5O15539 181 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MBTPS2O43462 519 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HCRTR1O43613 425 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HCN1O60741 890 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CTNSO60931 367 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RDH16O75452 317 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RGS11O94810 467 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNK2O95069 426 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDRT1O95170 752 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LYPD3O95274 346 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 APOA1P02647 267 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSF2P04141 144 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PROS1P07225 676 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HBQ1P09105 142 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 GKN3PP0CG01 181 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TFPIP10646 304 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 IFI30P13284 250 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RNH1P13489 461 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRG2P13727 222 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAOAP21397 527 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 S1PR1P21453 382 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 DRD5P21918 477 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PAICSP22234 425 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms