RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF32P17041 273 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 GLRXP35754 106 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 GUCA1AP43080 201 aaPredicted RBP20.39■□□□□ 0.85
VARS-217ENST00000440048 RPS6KA3P51812 740 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 HSF2Q03933 536 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 TSPAN31Q12999 210 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 MSMPQ1L6U9 139 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 PABPC1L2AQ5JQF8 200 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 PGM2L1Q6PCE3 622 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 SVOPLQ8N434 492 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 PAQR4Q8N4S7 273 aaPredicted RBP20.39■□□□□ 0.85
VARS-217ENST00000440048 BTBD10Q9BSF8 475 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 SLC7A8Q9UHI5 535 aa20.39■□□□□ 0.85
VARS-217ENST00000440048 IMPA2O14732 288 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 SCG5P05408 212 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 CST2P09228 141 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 APEHP13798 732 aaKnown RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 CTLA4P16410 223 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 MSR1P21757 451 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 APEX1P27695 318 aaKnown RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 SLC6A6P31641 620 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 EFNA4P52798 201 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 PPP1R8Q12972 351 aaKnown RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 KRTAP21-3Q3LHN1 58 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 PTCHD4Q6ZW05 846 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 ADCK1Q86TW2 530 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 CPEB3Q8NE35 698 aaKnown RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 OR9Q2Q8NGE9 314 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 SAMD8Q96LT4 415 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 ERMAPQ96PL5 475 aaPredicted RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 DOK1Q99704 481 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 SYT4Q9H2B2 425 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 CDH20Q9HBT6 801 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 POLE4Q9NR33 117 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 VNN3Q9NY84 501 aa20.38■□□□□ 0.85
VARS-217ENST00000440048 VSX1Q9NZR4 365 aaPredicted RBP20.38■□□□□ 0.85
VARS-217ENST00000440048 RNF223E7ERA6 249 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 RAP2AP10114 183 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 CDKN2AP42771 156 aaKnown RBP20.37■□□□□ 0.85
VARS-217ENST00000440048 PSG4Q00888 419 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 TBC1D28Q2M2D7 210 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 OR2T5Q6IEZ7 315 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 ZNF770Q6IQ21 691 aaPredicted RBP20.37■□□□□ 0.85
VARS-217ENST00000440048 ADGRG5Q8IZF4 528 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 LINC00471Q8N535 108 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 OR1J2Q8NGS2 313 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 OR2T29Q8NH02 315 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 AKR7LQ8NHP1 331 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 MRPL24Q96A35 216 aaKnown RBP20.37■□□□□ 0.85
VARS-217ENST00000440048 FOXN4Q96NZ1 517 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 SORCS2Q96PQ0 1159 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 VRK1Q99986 396 aaPredicted RBP20.37■□□□□ 0.85
VARS-217ENST00000440048 HIVEP2P31629 2446 aa20.37■□□□□ 0.85
VARS-217ENST00000440048 CR1P17927 2039 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 AQP12BA6NM10 295 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 SLC16A7O60669 478 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 LY6HO94772 140 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 CCNB2O95067 398 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 SNAP29O95721 258 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 F12P00748 615 aaPredicted RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 APLNRP35414 380 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 PPOXP50336 477 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 RPS23P62266 143 aaKnown RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 ENDOGQ14249 297 aaKnown RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 UGT2A3Q6UWM9 527 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 CLEC9AQ6UXN8 241 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 ZNF620Q6ZNG0 422 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 AQP12AQ8IXF9 295 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 ZNF525Q8N782 197 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 IFT27Q9BW83 186 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 ZNF416Q9BWM5 594 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 REG4Q9BYZ8 158 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 MRPL37Q9BZE1 423 aaKnown RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 OR2H1Q9GZK4 316 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 WNT5BQ9H1J7 359 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 LRMDAQ9H2I8 198 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 RERGLQ9H628 205 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 REEP1Q9H902 201 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 EMC7Q9NPA0 242 aa20.36■□□□□ 0.85
VARS-217ENST00000440048 FBXO9Q9UK97 447 aaPredicted RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 CHD3Q12873 2000 aaKnown RBP20.36■□□□□ 0.85
VARS-217ENST00000440048 ARPC3O15145 178 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 KHDRBS3O75525 346 aaKnown RBP20.35■□□□□ 0.85
VARS-217ENST00000440048 DNAJC8O75937 253 aaPredicted RBP20.35■□□□□ 0.85
VARS-217ENST00000440048 FAM157BP0CG42 384 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 PCBD1P61457 104 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 BNIP1Q12981 228 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 CLEC2AQ6UVW9 174 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 OR10H5Q8NGA6 315 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 RHNO1Q9BSD3 238 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 CHID1Q9BWS9 393 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 NUAK2Q9H093 628 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 OR51B6Q9H340 312 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 SAMHD1Q9Y3Z3 626 aaKnown RBP20.35■□□□□ 0.85
VARS-217ENST00000440048 TIMM10BQ9Y5J6 103 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 U3KQV3 271 aa20.35■□□□□ 0.85
VARS-217ENST00000440048 IGHV4-30-2A0A087WSY4 118 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 C12orf71A8MTZ7 269 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 LY6G6DO95868 133 aa20.34■□□□□ 0.85
VARS-217ENST00000440048 GASTP01350 101 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms