RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 OR51B6Q9H340 312 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 RERGLQ9H628 205 aa20.71■□□□□ 0.91
CPNE1-217ENST00000439669 VPS13CQ709C8 3753 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 TMEM129A0AVI4 362 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 AHCYL1O43865 530 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 KRT36O76013 467 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 CSF3P09919 207 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 MSR1P21757 451 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 FPR3P25089 353 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 APEX1P27695 318 aaKnown RBP20.7■□□□□ 0.9
CPNE1-217ENST00000439669 RPS6KA3P51812 740 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 MSMPQ1L6U9 139 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 FOXL2NBQ6ZUU3 175 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 MRPL37Q9BZE1 423 aaKnown RBP20.7■□□□□ 0.9
CPNE1-217ENST00000439669 RAB1BQ9H0U4 201 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 MAGIXQ9H6Y5 334 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 FZR1Q9UM11 496 aa20.7■□□□□ 0.9
CPNE1-217ENST00000439669 TNFRSF11BO00300 401 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 UBOX5O94941 541 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 PPP1R3DO95685 299 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 ERCC1P07992 297 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-217ENST00000439669 CST2P09228 141 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 CCNOP22674 350 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 SLC6A6P31641 620 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 CARTPTQ16568 116 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 FAM98BQ52LJ0 330 aaKnown RBP20.69■□□□□ 0.9
CPNE1-217ENST00000439669 ADCK1Q86TW2 530 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 CPEB3Q8NE35 698 aaKnown RBP20.69■□□□□ 0.9
CPNE1-217ENST00000439669 OR10H5Q8NGA6 315 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 AKR7LQ8NHP1 331 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 GNPDA2Q8TDQ7 276 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 ASB9Q96DX5 294 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 FOXN4Q96NZ1 517 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 SYT4Q9H2B2 425 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 OR52D1Q9H346 318 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 POLE4Q9NR33 117 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 LYVE1Q9Y5Y7 322 aa20.69■□□□□ 0.9
CPNE1-217ENST00000439669 SNAP29O95721 258 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 CTLA4P16410 223 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 MAGEA2P43356 314 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 PCBD1P61457 104 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 RGS7BPQ6MZT1 257 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-217ENST00000439669 PGBD2Q6P3X8 592 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 ICA1LQ8NDH6 482 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 ERMAPQ96PL5 475 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-217ENST00000439669 OR2H1Q9GZK4 316 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 EMC7Q9NPA0 242 aa20.68■□□□□ 0.9
CPNE1-217ENST00000439669 C12orf71A8MTZ7 269 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 M0R233 179 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 SLC16A7O60669 478 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 LCKP06239 509 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 ADRA2AP08913 450 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 STOMP27105 288 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 GSSP48637 474 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 EVX1P49640 407 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 PDLIM4P50479 330 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 PSG4Q00888 419 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 ENDOGQ14249 297 aaKnown RBP20.67■□□□□ 0.9
CPNE1-217ENST00000439669 RFX4Q33E94 735 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 C1orf94Q6P1W5 598 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 ZCCHC24Q8N2G6 241 aaKnown RBP20.67■□□□□ 0.9
CPNE1-217ENST00000439669 OR9Q2Q8NGE9 314 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 C10orf105Q8TEF2 133 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 IFT27Q9BW83 186 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 ZNF416Q9BWM5 594 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 TRIM15Q9C019 465 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 VSX1Q9NZR4 365 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-217ENST00000439669 DUSP13Q9UII6 198 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 TIMM10BQ9Y5J6 103 aa20.67■□□□□ 0.9
CPNE1-217ENST00000439669 A0A1W2PPW3 197 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 IMPA2O14732 288 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 GYG2O15488 501 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 SYNGR3O43761 229 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 KHDRBS3O75525 346 aaKnown RBP20.66■□□□□ 0.9
CPNE1-217ENST00000439669 TXNDC12O95881 172 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 SCG5P05408 212 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 APEHP13798 732 aaKnown RBP20.66■□□□□ 0.9
CPNE1-217ENST00000439669 SLC25A16P16260 332 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 RAD52P43351 418 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 GDI2P50395 445 aaKnown RBP20.66■□□□□ 0.9
CPNE1-217ENST00000439669 TSPAN31Q12999 210 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 DNAL1Q4LDG9 190 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 UGT2A3Q6UWM9 527 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 PTCHD4Q6ZW05 846 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 LRP11Q86VZ4 500 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 JAZF1Q86VZ6 243 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 ALDH16A1Q8IZ83 802 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 POP5Q969H6 163 aaKnown RBP20.66■□□□□ 0.9
CPNE1-217ENST00000439669 SAMD8Q96LT4 415 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 WNT5BQ9H1J7 359 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 TPK1Q9H3S4 243 aa20.66■□□□□ 0.9
CPNE1-217ENST00000439669 C5orf49A4QMS7 147 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 CCNB2O95067 398 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 NOS3P29474 1203 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 CDKN2AP42771 156 aaKnown RBP20.65■□□□□ 0.9
CPNE1-217ENST00000439669 HMGA2P52926 109 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 ERVS71-1P61550 626 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 ZNF774Q6NX45 483 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 ZNF620Q6ZNG0 422 aa20.65■□□□□ 0.9
CPNE1-217ENST00000439669 LINC00471Q8N535 108 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms