RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TSPAN31Q12999 210 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 KRR1Q13601 381 aaKnown RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 FHL1Q13642 323 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 GK3PQ14409 553 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 PGM2L1Q6PCE3 622 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 ARL9Q6T311 187 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 FAM122BQ7Z309 247 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 MYPOPQ86VE0 399 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 JAZF1Q86VZ6 243 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 CIARTQ8N365 385 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 OR52L1Q8NGH7 329 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 FAM168AQ92567 244 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 MRPL24Q96A35 216 aaKnown RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 FUZQ9BT04 418 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 OR52D1Q9H346 318 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 RERGLQ9H628 205 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 YY1AP1Q9H869 796 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 DUSP13Q9UII6 198 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 ADAM18Q9Y3Q7 739 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 UGT2A1Q9Y4X1 527 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 ARFGEF3Q5TH69 2177 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 IGKV1D-43A0A0B4J1Z2 117 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 TCRBV5S2A0A599 114 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 AQP12BA6NM10 295 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 M0R233 179 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 NDUFS8O00217 210 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SOCS2O14508 198 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 GNGT2O14610 69 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 ARPC3O15145 178 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SYNGR3O43761 229 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 IDH3BO43837 385 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SLC16A7O60669 478 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 ATP5HO75947 161 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 UBOX5O94941 541 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SNAP29O95721 258 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 TXNDC12O95881 172 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 LCKP06239 509 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 HEXAP06865 529 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 MMP7P09237 267 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-216ENST00000439475 RAP2AP10114 183 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 MAGEA2P43356 314 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 GSSP48637 474 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 CENPAP49450 140 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 UCP2P55851 309 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 MESTQ5EB52 335 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 OR2T5Q6IEZ7 315 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 DNM1P46Q6ZS02 220 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 FOXL2NBQ6ZUU3 175 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF584Q8IVC4 421 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 AQP12AQ8IXF9 295 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SVOPLQ8N434 492 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 CLDN22Q8N7P3 220 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF540Q8NDQ6 660 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 OR2T29Q8NH02 315 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 FANK1Q8TC84 345 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 HTRA1Q92743 480 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 NABP1Q96AH0 204 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 CCDC124Q96CT7 223 aaKnown RBP9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 BTBD10Q9BSF8 475 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 IFT27Q9BW83 186 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 ELOVL3Q9HB03 270 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 POLE4Q9NR33 117 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 VSX1Q9NZR4 365 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-216ENST00000439475 NDRG4Q9ULP0 352 aaKnown RBP9.03□□□□□ -0.96
MCF2L-216ENST00000439475 SAMHD1Q9Y3Z3 626 aaKnown RBP9.03□□□□□ -0.96
MCF2L-216ENST00000439475 LYVE1Q9Y5Y7 322 aa9.03□□□□□ -0.96
MCF2L-216ENST00000439475 A0A1W2PPW3 197 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 LOC390937A0A1W2PQ73 354 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 TMEM129A0AVI4 362 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 H7C1C5 153 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 GPRIN2O60269 458 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 DNAJC8O75937 253 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 PPP1R3DO95685 299 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 LY6G6DO95868 133 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 MT-ND5P03915 603 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 COX5BP10606 129 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 CCL2P13500 99 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF26P17031 533 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 GSTM3P21266 225 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 APEX1P27695 318 aaKnown RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 GCH1P30793 250 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 ARHGDIAP52565 204 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 LSM6P62312 80 aaKnown RBP9.02□□□□□ -0.97
MCF2L-216ENST00000439475 LCN6P62502 163 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 PPP2R2BQ00005 443 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 PSG4Q00888 419 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 MICAQ29983 383 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 ZNF718Q3SXZ3 478 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 GLB1L2Q8IW92 636 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 ICA1LQ8NDH6 482 aa9.02□□□□□ -0.97
MCF2L-216ENST00000439475 OR1J1Q8NGS3 322 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms