RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TIMP4Q99727 224 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 TLNRD1Q9H1K6 362 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 ANKRD19PQ9H560 264 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 DZANK1Q9NVP4 752 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 MBD2Q9UBB5 411 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 SIGLEC7Q9Y286 467 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 FREM3P0C091 2139 aa9.02□□□□□ -0.97
CDC42SE1-202ENST00000439374 CPED1A4D0V7 1026 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR5H14A6NHG9 310 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 TBX19O60806 448 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 IGKV1D-16P01601 117 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NGFRP08138 427 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 FAUP35544 74 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NR0B1P51843 470 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 VWA2Q5GFL6 755 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 MED25Q71SY5 747 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMEM17Q86X19 198 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 GALNT16Q8N428 558 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 C16orf52Q8NHV5 167 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 CD300LFQ8TDQ1 290 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NPRL2Q8WTW4 380 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 HGDQ93099 445 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 JSRP1Q96MG2 331 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF285Q96NJ3 590 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF649Q9BS31 505 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DNTTIP1Q9H147 329 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ACKR4Q9NPB9 350 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 AKAP7Q9P0M2 348 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 KIF25Q9UIL4 384 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 LAMP5Q9UJQ1 280 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 LRRK1Q38SD2 2015 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMEM272A0A1B0GTI8 110 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 A0A1B0GW55 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMEM82A0PJX8 343 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRR32B1ATL7 298 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ACOT7O00154 380 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ABCD4O14678 606 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NDUFB2O95178 105 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 GIPP09681 153 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L2P0CJ85 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L3P0CJ86 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L4P0CJ87 422 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L5P0CJ88 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L6P0CJ89 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4L7P0CJ90 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 RAB6AP20340 208 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 CSNK1EP49674 416 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 EEF1A1P68104 462 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR10Z1Q8NGY1 313 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ELL3Q9HB65 397 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 DUX4Q9UBX2 424 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 KLHDC2Q9Y2U9 406 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 A0A1B0GUH1 482 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 GABARAPH6UMI1 98 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 SCDO00767 359 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF254O75437 659 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 IGHA1P01876 353 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 PGAM2P15259 253 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NQO2P16083 231 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRSS3P35030 304 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 TLE1Q04724 770 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 PRICKLE4Q2TBC4 344 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NCMAPQ5T1S8 102 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 C1QL3Q5VWW1 255 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 FAM199XQ6PEV8 388 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 RTL10Q7L3V2 364 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC29A4Q7RTT9 530 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR6V1Q8N148 313 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 NUDCD2Q8WVJ2 157 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 KISS1RQ969F8 398 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 WDR76Q9H967 626 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 URGCP-MRPS24S4R325 110 aa9.01□□□□□ -0.97
CDC42SE1-202ENST00000439374 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 PLPP2O43688 288 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 MST1P26927 711 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 CD80P33681 288 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 MAP3K8P41279 467 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 PSG6Q00889 435 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 NSDHLQ15738 373 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 PWWP2BQ6NUJ5 590 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 STAC2Q6ZMT1 411 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 BPIFB2Q8N4F0 458 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR5M9Q8NGP3 310 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR14A16Q8NHC5 309 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 ELSPBP1Q96BH3 223 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 OR10A5Q9H207 317 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 SYT4Q9H2B2 425 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 CMC2Q9NRP2 79 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 ABRACLQ9P1F3 81 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 GRHPRQ9UBQ7 328 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 FOXJ3Q9UPW0 622 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 HEATR5AQ86XA9 2040 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 OIP5O43482 229 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 SSX5O60225 188 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 IL12BP29460 328 aa9□□□□□ -0.97
CDC42SE1-202ENST00000439374 RBM34P42696 430 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms