RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OR5V1Q9UGF6 321 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 ATPIF1Q9UII2 106 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 RARRES3Q9UL19 164 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 SRPK3Q9UPE1 567 aa6.09□□□□□ -1.44
CSDE1-205ENST00000438362 SF3B6Q9Y3B4 125 aaKnown RBP6.09□□□□□ -1.44
CSDE1-205ENST00000438362 A0A0A6YYH2 397 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LOC107986453A0A1B0GWG9 222 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 C7orf66A4D0T2 115 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TLCD2A6NGC4 264 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OR5H14A6NHG9 310 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 A6NJ64 397 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LEUTXA8MZ59 168 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TOR1AO14656 332 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OGG1O15527 345 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TRAPPC6AO75865 159 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GLSO94925 669 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OPN1LWP04000 364 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OR4E1P0C645 316 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF93P35789 620 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 RGS19P49795 217 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 DLX2Q07687 328 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SLC17A1Q14916 467 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 PRICKLE4Q2TBC4 344 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 KRBOX4Q5JUW0 171 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LYPD8Q6UX82 237 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 RHOUQ7L0Q8 258 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GRINAQ7Z429 371 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SULF2Q8IWU5 870 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 RELL2Q8NC24 303 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OR11H7Q8NGC8 314 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MAFIPQ8WZ33 124 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ELSPBP1Q96BH3 223 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LRRC46Q96FV0 321 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 JAM3Q9BX67 310 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MCCC2Q9HCC0 563 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 VSX1Q9NZR4 365 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 FOXJ3Q9UPW0 622 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MRPS28Q9Y2Q9 187 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SIRT4Q9Y6E7 314 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TET1Q8NFU7 2136 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TNS1Q9HBL0 1735 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 IDSB3KWA1 339 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SULT2B1O00204 365 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SULT1C2O00338 296 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SLC17A2O00624 439 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GMDSO60547 372 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 OR8U9P0C7N5 309 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SULT1A3P0DMM9 295 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SULT1A4P0DMN0 295 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CCNOP22674 350 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GNRHRP30968 328 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MAGEB1P43366 347 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SLC25A1P53007 311 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CAMK2DQ13557 499 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MISPQ8IVT2 679 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SFTPA1Q8IWL2 248 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 C3orf49Q96BT1 292 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF707Q96C28 371 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CRB3Q9BUF7 120 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 NXF5Q9H1B4 397 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SLC25A32Q9H2D1 315 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF442Q9H7R0 627 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SLCO1C1Q9NYB5 712 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CD207Q9UJ71 328 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CES1P1Q9UKY3 287 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GREB1Q4ZG55 1949 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SPTBP11277 2137 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CTDSPLO15194 276 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GSTZ1O43708 216 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 FBXO24O75426 580 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 DIRAS3O95661 229 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CHRM2P08172 466 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 S100A2P29034 98 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 BIDP55957 195 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TAS2R46P59540 309 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 FXYD4P59646 89 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 GUCA2AQ02747 115 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ACY1Q03154 408 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 C17orf67Q0P5P2 114 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SNTB1Q13884 538 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF74Q16587 644 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ACOT7LQ6ZUV0 252 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 PRSS42Q7Z5A4 293 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 KIAA0907Q7Z7F0 614 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 ANGPTL5Q86XS5 388 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 CDH26Q8IXH8 852 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SPICQ8N5J4 248 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TTC9Q92623 222 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 SPTSSAQ969W0 71 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 TRAF4Q9BUZ4 470 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 PTDSS2Q9BVG9 487 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MCOLN1Q9GZU1 580 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LAT2Q9GZY6 243 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 LHX9Q9NQ69 397 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 BIN3Q9NQY0 253 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms