RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 BEND4Q6ZU67 534 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 NCCRP1Q6ZVX7 275 aaPredicted RBP8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF627Q7L945 461 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 SHFQ7M4L6 423 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 PRSS48Q7RTY5 328 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 ERI1Q8IV48 349 aaKnown RBP8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 LIX1LQ8IVB5 337 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 SLC35F2Q8IXU6 374 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 SLC22A24Q8N4F4 322 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 ACBD7Q8N6N7 88 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 OR10H5Q8NGA6 315 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 NABP1Q96AH0 204 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 ALKBH3Q96Q83 286 aaPredicted RBP8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 MNTQ99583 582 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 FOXB1Q99853 325 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 CDADC1Q9BWV3 514 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 CDCA4Q9BXL8 241 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 CCDC90BQ9GZT6 254 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 OPN3Q9H1Y3 402 aaPredicted RBP8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 PIGMQ9H3S5 423 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 EMC7Q9NPA0 242 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 KCNG2Q9UJ96 466 aa8.69□□□□□ -1.02
AC004448.3-201ENST00000435953 MPDZO75970 2070 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 RP1L1Q8IWN7 2480 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 A0A087WXM4 84 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 DAPL1A0PJW8 107 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 C12orf71A8MTZ7 269 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 A8MXE2 369 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 DVL2O14641 736 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 MSTNO14793 375 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 LRRTM2O43300 516 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 IGHA1P01876 353 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 MT-ND2P03891 347 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 HTR1AP08908 422 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 CST2P09228 141 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 OR8G3PP0DMU2 310 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ALOX5APP20292 161 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 MSR1P21757 451 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 BMP5P22003 454 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 GNLYP22749 145 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 IGHV1-2P23083 117 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ETV1P50549 477 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 SH3BGRP55822 239 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ADAM8P78325 824 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 TGFBR3Q03167 851 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 P2RY6Q15077 328 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 NRN1LQ496H8 165 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 C9orf135Q5VTT2 229 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ANKRD16Q6P6B7 361 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF773Q6PK81 442 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF474Q6S9Z5 364 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF813Q6ZN06 617 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 DPY19L4Q7Z388 723 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 LHFPL3Q86UP9 236 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 CDC20BQ86Y33 519 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 SKA3Q8IX90 412 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 SPARTQ8N0X7 666 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 GABRG1Q8N1C3 465 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF433Q8N7K0 673 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF454Q8N9F8 522 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 OR10H4Q8NGA5 316 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 OTOSQ8NHW6 89 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 THEM6Q8WUY1 208 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 BCL2L2Q92843 193 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 SIGLEC11Q96RL6 698 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF649Q9BS31 505 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 JAM3Q9BX67 310 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 NELFAQ9H3P2 528 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 INPP5EQ9NRR6 644 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 CHCHD3Q9NX63 227 aaKnown RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 CLEC2DQ9UHP7 191 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 CYB5R1Q9UHQ9 305 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 ERRFI1Q9UJM3 462 aaPredicted RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 EXOSC1Q9Y3B2 195 aaKnown RBP8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 SNX5Q9Y5X3 404 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 TMEM14AQ9Y6G1 99 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 COMMD3-BMI1R4GMX3 469 aa8.68□□□□□ -1.02
AC004448.3-201ENST00000435953 A0A096LPE4 126 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 A0A1W2PPZ6 126 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 A0A1W2PQL4 384 aaPredicted RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 TRIM64CA6NLI5 447 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 EIF4E1BA6NMX2 242 aaKnown RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 ZNF670-ZNF695F2Z2N8 137 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 C1QL1O75973 258 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 ITGA5P08648 1049 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 SPARCP09486 303 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 LIMS3P0CW19 117 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 LIMS4P0CW20 117 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 MYL12AP19105 171 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 RPS27P42677 84 aaKnown RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 ACTC1P68032 377 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 ACTA1P68133 377 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 EMX1Q04741 257 aaPredicted RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 POLEQ07864 2286 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 ENDOGQ14249 297 aaKnown RBP8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 GALEQ14376 348 aa8.67□□□□□ -1.02
AC004448.3-201ENST00000435953 IRF3Q14653 427 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms