RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IMPA2O14732 288 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 DNAJC8O75937 253 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-207ENST00000435455 CCNB2O95067 398 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 MSR1P21757 451 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 GLRXP35754 106 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 DSCR9P59020 149 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 TNK1Q13470 666 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 TBC1D28Q2M2D7 210 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 RFX4Q33E94 735 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 PGBD2Q6P3X8 592 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 PGM2L1Q6PCE3 622 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 ERMAPQ96PL5 475 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-207ENST00000435455 WACQ9BTA9 647 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 VSX1Q9NZR4 365 aaPredicted RBP14.04□□□□□ -0.16
SMPD4-207ENST00000435455 C2CD3Q4AC94 2353 aa14.04□□□□□ -0.16
SMPD4-207ENST00000435455 C12orf71A8MTZ7 269 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SOCS2O14508 198 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 ARPC3O15145 178 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 IDH3BO43837 385 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SSX4O60224 188 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SNAP29O95721 258 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 ZNF32P17041 273 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 LAP3P28838 519 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 APLNRP35414 380 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 EVX1P49640 407 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 PPOXP50336 477 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 EFNA4P52798 201 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 BNIP1Q12981 228 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 GK3PQ14409 553 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 PABPC1L2AQ5JQF8 200 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 RPL13AP3Q6NVV1 102 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 CLEC2AQ6UVW9 174 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 ZNF620Q6ZNG0 422 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SYT9Q86SS6 491 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 ALDH16A1Q8IZ83 802 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 ADGRG5Q8IZF4 528 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 OR9Q2Q8NGE9 314 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 OR4C15Q8NGM1 316 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 RHNO1Q9BSD3 238 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 IFT27Q9BW83 186 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SYT4Q9H2B2 425 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 REEP1Q9H902 201 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 POLE4Q9NR33 117 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 SAMHD1Q9Y3Z3 626 aaKnown RBP14.03□□□□□ -0.16
SMPD4-207ENST00000435455 FKBP7Q9Y680 259 aa14.03□□□□□ -0.16
SMPD4-207ENST00000435455 NSD1Q96L73 2696 aaPredicted RBP14.02□□□□□ -0.16
SMPD4-207ENST00000435455 DHRS12A0PJE2 317 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 GPRIN2O60269 458 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 SLC16A7O60669 478 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 KHDRBS3O75525 346 aaKnown RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 ATP5HO75947 161 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 PPP1R3DO95685 299 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 CTLA4P16410 223 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 APEX1P27695 318 aaKnown RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 PCSK6P29122 969 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 RASSF2P50749 326 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 ENDOGQ14249 297 aaKnown RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 FLOT2Q14254 428 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 ZNF770Q6IQ21 691 aaPredicted RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 DNM1P34Q6PK57 102 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 DNM1P46Q6ZS02 220 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 JAZF1Q86VZ6 243 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 GLB1L2Q8IW92 636 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 CIARTQ8N365 385 aaPredicted RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 MRPL24Q96A35 216 aaKnown RBP14.02□□□□□ -0.17
SMPD4-207ENST00000435455 SAMD8Q96LT4 415 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 SNX18Q96RF0 628 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 ZNF416Q9BWM5 594 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 CHID1Q9BWS9 393 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 TIMM10BQ9Y5J6 103 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 CDH10Q9Y6N8 788 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 NF1P21359 2839 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 CSPG4Q6UVK1 2322 aa14.02□□□□□ -0.17
SMPD4-207ENST00000435455 TMEM129A0AVI4 362 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 SMAD7O15105 426 aaKnown RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 F12P00748 615 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 RENP00797 406 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 CST1P01037 141 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 ERCC1P07992 297 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 CSF3P09919 207 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 NOS3P29474 1203 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 CRABP1P29762 137 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 CDKN2AP42771 156 aaKnown RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 PSG4Q00888 419 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 MICAQ29983 383 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 RASSF6Q6ZTQ3 369 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 SVOPLQ8N434 492 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 PAQR4Q8N4S7 273 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 OR52L1Q8NGH7 329 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 CANT1Q8WVQ1 401 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 DOK1Q99704 481 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 VRK1Q99986 396 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-207ENST00000435455 OR2H1Q9GZK4 316 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 RAB1BQ9H0U4 201 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 WNT5BQ9H1J7 359 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 RERGLQ9H628 205 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 YY1AP1Q9H869 796 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 DYNLRB1Q9NP97 96 aa14.01□□□□□ -0.17
SMPD4-207ENST00000435455 VNN3Q9NY84 501 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms