RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 COA3Q9Y2R0 106 aaPredicted RBP9.37□□□□□ -0.91
CD44-210ENST00000434472 LRP12Q9Y561 859 aa9.37□□□□□ -0.91
CD44-210ENST00000434472 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 CIB4A0PJX0 185 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 TUBAL3A6NHL2 446 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ALOX12BO75342 701 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 HRGP04196 525 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ALDOBP05062 364 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ISG15P05161 165 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 IGFBP3P17936 291 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 DNASE1L1P49184 302 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ARRB1P49407 418 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 ZNF81P51508 661 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 RPS15P62841 145 aaKnown RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 MELKQ14680 651 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 PCK2Q16822 640 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ODF4Q2M2E3 257 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 LGALSLQ3ZCW2 172 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 Q6ZTK2 550 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 CDH26Q8IXH8 852 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 NFAM1Q8NET5 270 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 PIGKQ92643 395 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 PTX4Q96A99 478 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 SEC22CQ9BRL7 303 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 DUSP15Q9H1R2 295 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 SLCO5A1Q9H2Y9 848 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 CHST11Q9NPF2 352 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 UPB1Q9UBR1 384 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 WNT16Q9UBV4 365 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 CTSFQ9UBX1 484 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ZNF69Q9UC07 566 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 ZNF107Q9UII5 783 aaPredicted RBP9.36□□□□□ -0.91
CD44-210ENST00000434472 SLC22A13Q9Y226 551 aa9.36□□□□□ -0.91
CD44-210ENST00000434472 A0A1W2PPC1 479 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 VSTM2BA6NLU5 285 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 H0YC42 278 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 MS4A18H0YCH9 400 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ETV2O00321 342 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 ADAM10O14672 748 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 PNPP00491 289 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 CYC1P08574 325 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 UBCP0CG48 685 aaKnown RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 TMIGD3P0DMS9 266 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 GABRA1P14867 456 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 HTR2CP28335 458 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SELENOPP49908 381 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR7A5Q15622 319 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 CLPPQ16740 277 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 MS4A18Q3C1V0 323 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SLC25A53Q5H9E4 307 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 KANSL1Q7Z3B3 1105 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 FTMTQ8N4E7 242 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 NKAIN3Q8N8D7 197 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 BMPERQ8N8U9 685 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SLC26A10Q8NG04 563 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR10H5Q8NGA6 315 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR13C3Q8NGS6 347 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR6N1Q8NGY5 312 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 RNF138Q8WVD3 245 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ASB5Q8WWX0 329 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ATOH1Q92858 354 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 SLC25A28Q96A46 364 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 MARVELD3Q96A59 401 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 FOXQ1Q9C009 403 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR11A1Q9GZK7 315 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ATG5Q9H1Y0 275 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 HEXA-AS1Q9H8Q6 139 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 FANCFQ9NPI8 374 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 PRMT8Q9NR22 394 aaPredicted RBP9.35□□□□□ -0.91
CD44-210ENST00000434472 SLC22A11Q9NSA0 550 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 ALKBH4Q9NXW9 302 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 OR52A1Q9UKL2 312 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 SPTBP11277 2137 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 EML5Q05BV3 1969 aa9.35□□□□□ -0.91
CD44-210ENST00000434472 TMEM265A0A087WTH1 108 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 TMEM272A0A1B0GTI8 110 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 C17orf51A8MQB3 221 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 OR2A4O95047 310 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ONECUT2O95948 504 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 WNT11O96014 354 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 ITGA5P08648 1049 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 H2BFMP0C1H6 154 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 PTHLHP12272 177 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 GTF2F2P13984 249 aa9.34□□□□□ -0.91
CD44-210ENST00000434472 BCKDHBP21953 392 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms