RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 DHRS1Q96LJ7 313 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF75AQ96N20 296 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 TSSK2Q96PF2 358 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 NMNAT3Q96T66 252 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 VRK1Q99986 396 aaPredicted RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRIM15Q9C019 465 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 SYT4Q9H2B2 425 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 FN3KQ9H479 309 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 SIAEQ9HAT2 523 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 EMC7Q9NPA0 242 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCNB1IP1Q9NPC3 277 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAIMQ9NVQ4 179 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 PDP1Q9P0J1 537 aaPredicted RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 STX18Q9P2W9 335 aaKnown RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 CRNNQ9UBG3 495 aaPredicted RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 COA3Q9Y2R0 106 aaPredicted RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 SAMHD1Q9Y3Z3 626 aaKnown RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 UGT2A1Q9Y4X1 527 aa5□□□□□ -1.61
HMGB3P24-201ENST00000433260 SPTAN1Q13813 2472 aaKnown RBP5□□□□□ -1.61
HMGB3P24-201ENST00000433260 IQCMA0A1B0GVH7 501 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC22A23A1A5C7 686 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PRSS37A4D1T9 235 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 VSTM5A8MXK1 200 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CENPBD1B2RD01 187 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SMAD7O15105 426 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SSX4O60224 188 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FKBP6O75344 327 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 E2F6O75461 281 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 KHDRBS3O75525 346 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TIPRLO75663 272 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGKV3-15P01624 115 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGLV1-44P01699 117 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 IGHA1P01876 353 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SERPINA5P05154 406 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 LCKP06239 509 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR4A8P0C604 315 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF35P13682 527 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 HIST1H1CP16403 213 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF14P17017 642 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF32P17041 273 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NPR2P20594 1047 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NR4A1P22736 598 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PAX7P23759 505 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FPR3P25089 353 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 APEX1P27695 318 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 POU1F1P28069 291 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SDHAP31040 664 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SLC6A6P31641 620 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SERPINF1P36955 418 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 MAGEA2P43356 314 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 GSSP48637 474 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 MRPS34P82930 218 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PSG4Q00888 419 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 GALK2Q01415 458 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 HSF2Q03933 536 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PLP2Q04941 152 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 SNTB2Q13425 540 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 KRR1Q13601 381 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 DAG1Q14118 895 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 RAB35Q15286 201 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 MEP1BQ16820 701 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PABPC1L2AQ5JQF8 200 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 Q5PR19 223 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 C10orf128Q5T292 105 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZBTB37Q5TC79 503 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM27BQ5VT28 67 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 LEG1Q6P5S2 330 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CCDC121Q6ZUS5 278 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FAM122BQ7Z309 247 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TGIF2LYQ8IUE0 185 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF584Q8IVC4 421 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 HS3ST5Q8IZT8 346 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZCCHC24Q8N2G6 241 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 LINC00471Q8N535 108 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ICA1LQ8NDH6 482 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CPEB3Q8NE35 698 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR10G2Q8NGC3 310 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 OR52E2Q8NGJ4 325 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FANK1Q8TC84 345 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 GIPC3Q8TF64 312 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NABP1Q96AH0 204 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NMD3Q96D46 503 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 MBD6Q96DN6 1003 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRMT61AQ96FX7 289 aaKnown RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 Q96MF0 132 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 FEVQ99581 238 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NIPSNAP1Q9BPW8 284 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TRAF4Q9BUZ4 470 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ALG12Q9BV10 488 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 ZNF416Q9BWM5 594 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 TSSK6Q9BXA6 273 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CACNG6Q9BXT2 260 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 PLA2G12AQ9BZM1 189 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NDEL1Q9GZM8 345 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 NUAK2Q9H093 628 aa4.99□□□□□ -1.61
HMGB3P24-201ENST00000433260 CXXC4Q9H2H0 198 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms