RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TMEM223A0PJW6 202 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 A6NDN8 102 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 KLHL41O60662 606 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 GABARAPO95166 117 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 AIFM1O95831 613 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CST1P01037 141 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 FABP3P05413 133 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 POLR2MP0CAP2 368 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 ZNF823P16415 610 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 ZNF43P17038 809 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 PGAM1P18669 254 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 RAB3AP20336 220 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 DTYMKP23919 212 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CSNK1A1P48729 337 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 MRPL19P49406 292 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 CRISP3P54108 245 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 RGS8P57771 180 aaPredicted RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 UBE2NP61088 152 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 NUTF2P61970 127 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 RAP1AP62834 184 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 KDSRQ06136 332 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 BST1Q10588 318 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CDH17Q12864 832 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 PON3Q15166 354 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 SPANXN2Q5MJ10 180 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CARD17Q5XLA6 110 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 H3F3CQ6NXT2 135 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 Q6ZR03 302 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 SSX9Q7RTT3 188 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 THOC6Q86W42 341 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 FAM228AQ86W67 206 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CALHM1Q8IU99 346 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 PGAM4Q8N0Y7 254 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 TTC5Q8N0Z6 440 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 FAM86B1Q8N7N1 296 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CYB561D1Q8N8Q1 229 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 OR8J1Q8NGP2 316 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 AKR7LQ8NHP1 331 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 TSEN15Q8WW01 171 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 DEDD2Q8WXF8 326 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 FRZBQ92765 325 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 N4BP2L2Q92802 583 aaPredicted RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 DCPSQ96C86 337 aaKnown RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 WFIKKN1Q96NZ8 548 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 GSDMAQ96QA5 445 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 ZNF382Q96SR6 550 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CHP1Q99653 195 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 C1orf198Q9H425 327 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 METTL7AQ9H8H3 244 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 TMEM165Q9HC07 324 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 NMRK1Q9NWW6 199 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 HRASLS2Q9NWW9 162 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 SLC7A8Q9UHI5 535 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 CTNNA3Q9UI47 895 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 KIAA1257Q9ULG3 409 aa1.3□□□□□ -2.2
CDC40-204ENST00000431461 MN1Q10571 1320 aaPredicted RBP1.3□□□□□ -2.2
CDC40-204ENST00000431461 MYO10Q9HD67 2058 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 IGKV1D-13A0A0B4J2D9 117 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 A0A0G2JLM5 398 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 LRCOL1A6NCL2 159 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 TCP11X1B4DZS4 312 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 BPY2O14599 106 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 CLOCKO15516 846 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 RBBP9O75884 186 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 SRP72O76094 671 aaKnown RBP1.29□□□□□ -2.2
CDC40-204ENST00000431461 RCBTB2O95199 551 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 SNX4O95219 450 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 FGGP02679 453 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 IGKV1-13P0DP09 117 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 GDI1P31150 447 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 BTCP35070 178 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 CEACAM6P40199 344 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 AQP2P41181 271 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 CDKN2BP42772 138 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 NSG1P42857 185 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 TMED10P49755 219 aaKnown RBP1.29□□□□□ -2.2
CDC40-204ENST00000431461 ERFP50548 548 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 STXBP1P61764 594 aaKnown RBP1.29□□□□□ -2.2
CDC40-204ENST00000431461 SLAQ13239 276 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 OR7A5Q15622 319 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 STK11Q15831 433 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 POU2AF1Q16633 256 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 FAM83EQ2M2I3 478 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 COX19Q49B96 90 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 XKR4Q5GH76 650 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 FAM78AQ5JUQ0 283 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 LY6G6FQ5SQ64 297 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 AVPI1Q5T686 147 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 ANKRD26P1Q6NSI1 321 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 SLC16A14Q7RTX9 510 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 NEGR1Q7Z3B1 354 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 CMC1Q7Z7K0 106 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 STPG2Q8N412 459 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 MS4A15Q8N5U1 240 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 GATSQ8NAP1 163 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 HSD17B11Q8NBQ5 300 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 OR10G2Q8NGC3 310 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 OR4A4PQ8NGN8 299 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 COQ8AQ8NI60 647 aa1.29□□□□□ -2.2
CDC40-204ENST00000431461 ZNF502Q8TBZ5 544 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms