RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 ACTG1P63261 375 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 SLC3A1Q07837 685 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 PIN1Q13526 163 aaPredicted RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 ALG10Q5BKT4 473 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ZMAT1Q5H9K5 638 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 AVPI1Q5T686 147 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 FAM27BQ5VT28 67 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ALDH16A1Q8IZ83 802 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ZNF101Q8IZC7 436 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 MOSPD2Q8NHP6 518 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 HDAC2Q92769 488 aaKnown RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 LRRC58Q96CX6 371 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 MARS2Q96GW9 593 aaKnown RBP12.67□□□□□ -0.38
MSH5-208ENST00000429846 ALG12Q9BV10 488 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 PLPP2O43688 288 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 IGHMP01871 453 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 TNFRSF1BP20333 461 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 CDAP32320 146 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 GUCA1AP43080 201 aaPredicted RBP12.66□□□□□ -0.38
MSH5-208ENST00000429846 LIMS1P48059 325 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 MMP15P51511 669 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 PCBD1P61457 104 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 GLO1Q04760 184 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 FMODQ06828 376 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 ST3GAL3Q11203 375 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 MAPRE2Q15555 327 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 TSTQ16762 297 aaKnown RBP12.66□□□□□ -0.38
MSH5-208ENST00000429846 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 SLC25A47Q6Q0C1 308 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 C1QL2Q7Z5L3 287 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 IPCEF1Q8WWN9 437 aaPredicted RBP12.66□□□□□ -0.38
MSH5-208ENST00000429846 PRRC1Q96M27 445 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 RBP7Q96R05 134 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 RBM4Q9BWF3 364 aaKnown RBP12.66□□□□□ -0.38
MSH5-208ENST00000429846 EGLN1Q9GZT9 426 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 DYSFO75923 2080 aa12.66□□□□□ -0.38
MSH5-208ENST00000429846 LOC100509620A0A075B734 347 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 LOC105371242A0A075B767 164 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 IGKV1D-43A0A0B4J1Z2 117 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 IGHV1-46P01743 117 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 CST2P09228 141 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 WNT5AP41221 380 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 ARFIP2P53365 341 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 RPL27P61353 136 aaKnown RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 ERVK-25P63136 954 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 PSG4Q00888 419 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 SGCAQ16586 387 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 ANKDD1AQ495B1 522 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 DCAF12L2Q5VW00 463 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 ARL9Q6T311 187 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 C1orf229Q6ZS94 237 aaPredicted RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 ZER1Q7Z7L7 766 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 PEG10Q86TG7 708 aaKnown RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 KLF14Q8TD94 323 aaPredicted RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 NSMAFQ92636 917 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
MSH5-208ENST00000429846 BPIFA2Q96DR5 249 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 GAL3ST1Q99999 423 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 WACQ9BTA9 647 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 SUCNR1Q9BXA5 334 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 TMPRSS13Q9BYE2 586 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 OR2H1Q9GZK4 316 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 VIPAS39Q9H9C1 493 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 ELOVL3Q9HB03 270 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 ZDHHC8Q9ULC8 765 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 TIMM10BQ9Y5J6 103 aa12.65□□□□□ -0.38
MSH5-208ENST00000429846 TENM1Q9UKZ4 2725 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 A6NIZ1 184 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 FAM220BPB1ANY3 271 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 MRASO14807 208 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 SPRY3O43610 288 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
MSH5-208ENST00000429846 UBOX5O94941 541 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 AVPP01185 164 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 CD55P08174 381 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 MAKP20794 623 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 MPV17P39210 176 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 OR1E2P47887 323 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 ARHGDIAP52565 204 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 RAP1BP61224 184 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 RAP1AP62834 184 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 TOP3AQ13472 1001 aaPredicted RBP12.64□□□□□ -0.39
MSH5-208ENST00000429846 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 SPATA46Q5T0L3 261 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 FOXL2NBQ6ZUU3 175 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 RFPL4BQ6ZWI9 263 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 HDXQ7Z353 690 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 SYT9Q86SS6 491 aa12.64□□□□□ -0.39
MSH5-208ENST00000429846 AKR7LQ8NHP1 331 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms