RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 VDAC3Q9Y277 283 aa12.29□□□□□ -0.44
THBS3-202ENST00000428962 B3GALT5Q9Y2C3 310 aa12.29□□□□□ -0.44
THBS3-202ENST00000428962 COA3Q9Y2R0 106 aaPredicted RBP12.29□□□□□ -0.44
THBS3-202ENST00000428962 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
THBS3-202ENST00000428962 LRP12Q9Y561 859 aa12.29□□□□□ -0.44
THBS3-202ENST00000428962 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
THBS3-202ENST00000428962 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 TMEM200CA6NKL6 621 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 ZNF354AO60765 605 aaPredicted RBP12.28□□□□□ -0.44
THBS3-202ENST00000428962 PEX14O75381 377 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 AQP8O94778 261 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 IFNGR1P15260 489 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 FSTP19883 344 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 IL11P20809 199 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 PTGS2P35354 604 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 HSF1Q00613 529 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 RAB11BQ15907 218 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 ETFDHQ16134 617 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 GSG1Q2KHT4 349 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 TSSK4Q6SA08 328 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 ARSKQ6UWY0 536 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 CATSPERDQ86XM0 798 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 ATOH1Q92858 354 aaPredicted RBP12.28□□□□□ -0.44
THBS3-202ENST00000428962 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
THBS3-202ENST00000428962 ARL5BQ96KC2 179 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 RANBP3Q9H6Z4 567 aaPredicted RBP12.28□□□□□ -0.44
THBS3-202ENST00000428962 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 SLC17A5Q9NRA2 495 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 MYOTQ9UBF9 498 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 WIF1Q9Y5W5 379 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 R4GMQ9 66 aa12.28□□□□□ -0.44
THBS3-202ENST00000428962 A0A1B0GVI7 797 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 ANKRD20A5PA0PJZ0 165 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 LIPT2A6NK58 231 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 XRCC3O43542 346 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 GLSO94925 669 aaPredicted RBP12.27□□□□□ -0.44
THBS3-202ENST00000428962 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.44
THBS3-202ENST00000428962 SYPP08247 313 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 FBXO45P0C2W1 286 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 HLA-DOBP13765 273 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 PSMB1P20618 241 aaKnown RBP12.27□□□□□ -0.44
THBS3-202ENST00000428962 AVPR2P30518 371 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 FAUP35544 74 aaKnown RBP12.27□□□□□ -0.44
THBS3-202ENST00000428962 POU3F1Q03052 451 aaPredicted RBP12.27□□□□□ -0.44
THBS3-202ENST00000428962 TOMM20Q15388 145 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 PHF19Q5T6S3 580 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 MTFR2Q6P444 385 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 DEGS2Q6QHC5 323 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 NDUFAF7Q7L592 441 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 LILRB4Q8NHJ6 448 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 KCNK17Q96T54 332 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 PRRX2Q99811 253 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 WDR54Q9H977 334 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 DIABLOQ9NR28 239 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 ZNF222Q9UK12 451 aa12.27□□□□□ -0.44
THBS3-202ENST00000428962 ARID1BQ8NFD5 2236 aaPredicted RBP12.27□□□□□ -0.45
THBS3-202ENST00000428962 SLC17A2O00624 439 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 HRGP04196 525 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 FGF5P12034 268 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 MFGE8Q08431 387 aaPredicted RBP12.27□□□□□ -0.45
THBS3-202ENST00000428962 PCK2Q16822 640 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 BTBD16Q32M84 506 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 PLPPR5Q32ZL2 321 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 FAM69BQ5VUD6 431 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 GLT8D1Q68CQ7 371 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 ANKRD16Q6P6B7 361 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 ZNF704Q6ZNC4 412 aaPredicted RBP12.27□□□□□ -0.45
THBS3-202ENST00000428962 HDDC2Q7Z4H3 204 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 MESP1Q9BRJ9 268 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 TAS2R8Q9NYW2 309 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 PISDQ9UG56 409 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 SLC22A13Q9Y226 551 aa12.27□□□□□ -0.45
THBS3-202ENST00000428962 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.45
THBS3-202ENST00000428962 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 MEN1O00255 615 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 OR2J2O76002 312 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 TGM6O95932 706 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 PNPP00491 289 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 CSRP1P21291 193 aaKnown RBP12.26□□□□□ -0.45
THBS3-202ENST00000428962 ACHEP22303 614 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 IL11RAQ14626 422 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 LYPD8Q6UX82 237 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 DNM1P46Q6ZS02 220 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 KDM8Q8N371 416 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 OR10H5Q8NGA6 315 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 IFI44Q8TCB0 444 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 PIGKQ92643 395 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 GCDHQ92947 438 aaPredicted RBP12.26□□□□□ -0.45
THBS3-202ENST00000428962 NPAS1Q99742 590 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 GPN3Q9UHW5 284 aaPredicted RBP12.26□□□□□ -0.45
THBS3-202ENST00000428962 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
THBS3-202ENST00000428962 RPH3AQ9Y2J0 694 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms