RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 CHRNA10Q9GZZ6 450 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 METTL17Q9H7H0 456 aaPredicted RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 KLHL9Q9P2J3 617 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 PCNX2A6NKB5 2137 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 TRAV18A0A075B6X5 111 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 IGHV3-64DA0A0J9YX35 117 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 TCRBV16S1A1N1A0A5B0 115 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 LEUTXA8MZ59 168 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 ARPC3O15145 178 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 SC5DO75845 299 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 POU3F2P20265 443 aaPredicted RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 CDK2P24941 298 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 PRPS1P60891 318 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 ISXQ2M1V0 245 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 LIN54Q6MZP7 749 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 FAM122BQ7Z309 247 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 PXKQ7Z7A4 578 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 C17orf82Q86X59 251 aaPredicted RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 SLITRK4Q8IW52 837 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 GIMAP1Q8WWP7 306 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 NXPE2Q96DL1 559 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 MRPL48Q96GC5 212 aaKnown RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 OR1F2PQ96R84 312 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 CMKLR1Q99788 373 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 MS4A7Q9GZW8 240 aaPredicted RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 CYSLTR2Q9NS75 346 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 MRPL22Q9NWU5 206 aaKnown RBP7.52□□□□□ -1.21
CD44-208ENST00000428726 STMN3Q9NZ72 180 aa7.52□□□□□ -1.21
CD44-208ENST00000428726 NCOA6Q14686 2063 aaPredicted RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 DIDO1Q9BTC0 2240 aaKnown RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 PCP4L1A6NKN8 68 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 M0QYG6 137 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 LGALS8O00214 317 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OGG1O15527 345 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 NUDT21O43809 227 aaKnown RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 GLCEO94923 617 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 AHSA1O95433 338 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 IGF2P01344 180 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 PNMTP11086 282 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 HLA-DMAP28067 261 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 SDHAP31040 664 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 GDNFP39905 211 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 SELENOPP49908 381 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 SNTB2Q13425 540 aaKnown RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 SF3A2Q15428 464 aaKnown RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 ST3GAL2Q16842 350 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 SLC35D3Q5M8T2 416 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 CCDC28AQ8IWP9 274 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 FAM109AQ8N4B1 249 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 DUSP18Q8NEJ0 188 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 INTS14Q96SY0 518 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 KCNJ15Q99712 375 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 RAB33BQ9H082 229 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 RARRES3Q9UL19 164 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 ACACAQ13085 2346 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 A0A1W2PP11 408 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 ZNF879B4DU55 563 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 RENP00797 406 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 C1QBP02746 253 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 CLDN20P56880 219 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 SRYQ05066 204 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TMEM225Q6GV28 225 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 STAC2Q6ZMT1 411 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TMED4Q7Z7H5 227 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 C9orf62Q8N4C0 152 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 FAM71CQ8NEG0 241 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OR4S1Q8NGB4 309 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OR2G2Q8NGZ5 317 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OR56B4Q8NH76 319 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OR14A16Q8NHC5 309 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 IFI44Q8TCB0 444 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 MAFIPQ8WZ33 124 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TRIM63Q969Q1 353 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 FAM71F1Q96KD3 344 aaPredicted RBP7.51□□□□□ -1.21
CD44-208ENST00000428726 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TAS2R4Q9NYW5 299 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 OR5V1Q9UGF6 321 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 MMACHCQ9Y4U1 282 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 CACNG2Q9Y698 323 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TACC2O95359 2948 aa7.51□□□□□ -1.21
CD44-208ENST00000428726 TRAV1-2A0A0B4J238 106 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 H3BMH7 237 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 ARL6IP5O75915 188 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 CD1AP06126 327 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 ASAH2BP0C7U1 165 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 RBMS1P29558 406 aaKnown RBP7.5□□□□□ -1.21
CD44-208ENST00000428726 KIR3DL2P43630 455 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 BLVRAP53004 296 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 RPS4XP62701 263 aaKnown RBP7.5□□□□□ -1.21
CD44-208ENST00000428726 CHAF1BQ13112 559 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 IL10RAQ13651 578 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 PDCD1Q15116 288 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 SGCAQ16586 387 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 LRRC37A5PQ49AS3 106 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 CDONQ4KMG0 1287 aa7.5□□□□□ -1.21
CD44-208ENST00000428726 TMEM69Q5SWH9 247 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms