RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ZNF48Q96MX3 618 aaPredicted RBP15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 MRPL13Q9BYD1 178 aaKnown RBP15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 MSL2Q9HCI7 577 aa15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 EGFL7Q9UHF1 273 aa15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 ZDHHC8Q9ULC8 765 aa15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 GMEB1Q9Y692 573 aa15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 USH1CQ9Y6N9 552 aa15.46■□□□□ 0.07
UPK3BP1-201ENST00000428678 LOC100509620A0A075B734 347 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 TRAPPC2LH3BP13 241 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 MGRN1O60291 552 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 TRMUO75648 421 aaKnown RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 ADH4P08319 380 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 ACADSP16219 412 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZNF12P17014 697 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 LIPAP38571 399 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 MRPL19P49406 292 aaKnown RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 PPP1CBP62140 327 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 MRPS34P82930 218 aaKnown RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 TNFAIP6P98066 277 aaPredicted RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 RPL18Q07020 188 aaKnown RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 SGCAQ16586 387 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZMAT1Q5H9K5 638 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 C10orf128Q5T292 105 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 EPGNQ6UW88 154 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 HDDC2Q7Z4H3 204 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 KLHL36Q8N4N3 616 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 SPICQ8N5J4 248 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 C11orf65Q8NCR3 313 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 ASB10Q8WXI3 467 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 TAF15Q92804 592 aaKnown RBP eCLIP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 MPP4Q96JB8 637 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 DIRC2Q96SL1 478 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 SLC19A3Q9BZV2 496 aa15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 MS4A7Q9GZW8 240 aaPredicted RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 CGGBP1Q9UFW8 167 aaPredicted RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 PRKDCP78527 4128 aaKnown RBP15.45■□□□□ 0.06
UPK3BP1-201ENST00000428678 CENPBD1B2RD01 187 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 M0QX08 132 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 POLR3GO15318 223 aaPredicted RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 TIMM8AO60220 97 aaPredicted RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 CD55P08174 381 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 RBMXP38159 391 aaKnown RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 DAP3P51398 398 aaKnown RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 UGT2B15P54855 530 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 PCBP3P57721 371 aaKnown RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 SEC61A1P61619 476 aaKnown RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 ERVK-25P63136 954 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 CYP51A1Q16850 503 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 LEG1Q6P5S2 330 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 TSPYL5Q86VY4 417 aaPredicted RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR4D11Q8NGI4 311 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 NSMAFQ92636 917 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 NABP1Q96AH0 204 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 SEPHS2Q99611 448 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 CPPED1Q9BRF8 314 aaPredicted RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 PATZ1Q9HBE1 687 aaKnown RBP15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 TMEM106BQ9NUM4 274 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 NKIRAS1Q9NYS0 192 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 UGT2A1Q9Y4X1 527 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 INSIG2Q9Y5U4 225 aa15.44■□□□□ 0.06
UPK3BP1-201ENST00000428678 VIMP08670 466 aaKnown RBP15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZNF133P52736 654 aaPredicted RBP15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 PSG4Q00888 419 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 FMODQ06828 376 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 CD47Q08722 323 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 TAF11Q15544 211 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 SLC9A3R2Q15599 337 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 CROCCP2Q86T23 111 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 PTOV1Q86YD1 416 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 C1orf174Q8IYL3 243 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 ZNF426Q9BUY5 554 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 SLITRK2Q9H156 845 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 MEPEQ9NQ76 525 aaPredicted RBP15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 INIPQ9NRY2 104 aa15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 POLR3KQ9Y2Y1 108 aaPredicted RBP15.43■□□□□ 0.06
UPK3BP1-201ENST00000428678 IGHV3OR16-10A0A075B7F0 116 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 H3BSA7 217 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 CLDN34H7C241 214 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 NGFP01138 241 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 CD247P20963 164 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 MDKP21741 143 aaPredicted RBP15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 TNFSF4P23510 183 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 AQP2P41181 271 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 MTNR1AP48039 350 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 SLC6A9P48067 706 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 TMEM155Q4W5P6 130 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 AGKQ53H12 422 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 MTX3Q5HYI7 312 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 ALDH16A1Q8IZ83 802 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 WNT5BQ9H1J7 359 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 SMURF2Q9HAU4 748 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 STX18Q9P2W9 335 aaKnown RBP15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR5V1Q9UGF6 321 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 KLHL21Q9UJP4 597 aa15.42■□□□□ 0.06
UPK3BP1-201ENST00000428678 IGKV1D-43A0A0B4J1Z2 117 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 OR7A10O76100 309 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 GPANK1O95872 356 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 FUT1P19526 365 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 OMGP23515 440 aa15.41■□□□□ 0.06
UPK3BP1-201ENST00000428678 PCGF2P35227 344 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms