RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ERRFI1Q9UJM3 462 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 TPRKBQ9Y3C4 175 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF462Q96JM2 2506 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 C12orf71A8MTZ7 269 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 RPL36A-HNRNPH2H7BZ11 118 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 PYCARD-AS1I3L0S3 204 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMCC2O75069 709 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 RAD51DO75771 328 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TNFAIP8O95379 198 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 RAB36O95755 333 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 HRGP04196 525 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SBK2P0C263 348 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR8G3PP0DMU2 310 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 MYL12AP19105 171 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 COX5AP20674 150 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 IGHV1-2P23083 117 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CRHBPP24387 322 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ENTPD1P49961 510 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ASCL1P50553 236 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CXCR4P61073 352 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 RAB40BQ12829 278 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TSC22D1Q15714 1073 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 STK11Q15831 433 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC25A35Q3KQZ1 300 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 KCTD21Q4G0X4 260 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 HIKESHIQ53FT3 197 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ANKRD16Q6P6B7 361 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF474Q6S9Z5 364 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 BHLHA15Q7RTS1 189 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC16A14Q7RTX9 510 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC16A9Q7RTY1 509 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CXorf67Q86X51 503 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 LINC00346Q8IVM7 164 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC35F2Q8IXU6 374 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TIGD4Q8IY51 512 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 GABRG1Q8N1C3 465 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 LRRC18Q8N456 261 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC22A24Q8N4F4 322 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 C1orf162Q8NEQ5 155 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR4F15Q8NGB8 312 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR52I1Q8NGK6 324 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR1K1Q8NGR3 316 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CA5BP1Q8WTZ4 195 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SMAP2Q8WU79 429 aaPredicted RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 MYDGFQ969H8 173 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 NABP1Q96AH0 204 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TBX5Q99593 518 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SH3GL3Q99963 347 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF416Q9BWM5 594 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CDADC1Q9BWV3 514 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 TTTY10Q9BZA0 68 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CCDC90BQ9GZT6 254 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SIAEQ9HAT2 523 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CCNB1IP1Q9NPC3 277 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 PLCXD1Q9NUJ7 323 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 HAO2Q9NYQ3 351 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 KCNG2Q9UJ96 466 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC5A6Q9Y289 635 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 MPDZO75970 2070 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 FREM3P0C091 2139 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 KIAA1549Q9HCM3 1950 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 DNAJC13O75165 2243 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 SVILO95425 2214 aa6.95□□□□□ -1.3
HMGA1P4-201ENST00000428643 DAPL1A0PJW8 107 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 A8MXE2 369 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF670-ZNF695F2Z2N8 137 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 RGS10O43665 173 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZG16O60844 167 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 HLA-HP01893 362 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SCG5P05408 212 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 CST2P09228 141 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 CD79AP11912 226 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 RPS27P42677 84 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 CDH15P55291 814 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 GABARAPL2P60520 117 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 UBE2NP61088 152 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TUBA1BP68363 451 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TUBA4AP68366 448 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 PIGFQ07326 219 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ST3GAL4Q11206 333 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 EIF2B1Q14232 305 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ENDOGQ14249 297 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 KCNMB1Q16558 191 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TBRG1Q3YBR2 411 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC36A2Q495M3 483 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 NRN1LQ496H8 165 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC18B1Q6NT16 456 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMEM154Q6P9G4 183 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 CORO6Q6QEF8 472 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TUBA1AQ71U36 451 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SPATC1Q76KD6 591 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 DPY19L4Q7Z388 723 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms