RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 FBXW5Q969U6 566 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 FOXB1Q99853 325 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 DGCR6LQ9BY27 220 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 MGAT4BQ9UQ53 548 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 OTOGQ6ZRI0 2925 aa13.68□□□□□ -0.22
CLK3P2-201ENST00000427566 E9PQ18 207 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SDHAP31040 664 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CDAP32320 146 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CDKN2AP42771 156 aaKnown RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SH3BGRP55822 239 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 GABARAPL2P60520 117 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ISL1P61371 349 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SPOCK1Q08629 439 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ETFDHQ16134 617 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 C6orf141Q5SZD1 244 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SLC22A25Q6T423 547 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF813Q6ZN06 617 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 RASSF6Q6ZTQ3 369 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 LILRB1Q8NHL6 650 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 NSMAFQ92636 917 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 PERPQ96FX8 193 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 RADILQ96JH8 1075 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 PITX2Q99697 317 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 IFT27Q9BW83 186 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 GABARAPL3Q9BY60 117 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 YIPF3Q9GZM5 350 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 RIBC2Q9H4K1 309 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 IL20Q9NYY1 176 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF224Q9NZL3 707 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 LAMP3Q9UQV4 416 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CDH10Q9Y6N8 788 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CADP27708 2225 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CENPBD1B2RD01 187 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 MITFO75030 526 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ROS1P08922 2347 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CCDC159P0C7I6 412 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 PATE4P0C8F1 98 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 PTAFRP25105 342 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SLC6A6P31641 620 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 TTKP33981 857 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CAPZA2P47755 286 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CDH11P55287 796 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CDH15P55291 814 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ESRRGP62508 458 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 NKX6-1P78426 367 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 KRR1Q13601 381 aaKnown RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CNPY1Q3B7I2 92 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF773Q6PK81 442 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SLC25A47Q6Q0C1 308 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF627Q7L945 461 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 HDDC2Q7Z4H3 204 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ZNF611Q8N823 705 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 FGFBP3Q8TAT2 258 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CXXC4Q9H2H0 198 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 NOX3Q9HBY0 568 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 TMEM38BQ9NVV0 291 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 CISD1Q9NZ45 108 aaKnown RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 REV1Q9UBZ9 1251 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 ENOPH1Q9UHY7 261 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 NDRG4Q9ULP0 352 aaKnown RBP13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 UGT2A1Q9Y4X1 527 aa13.67□□□□□ -0.22
CLK3P2-201ENST00000427566 SLC22A23A1A5C7 686 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 PRSS37A4D1T9 235 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 A6NIZ1 184 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 BHLHE40O14503 412 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 TXNDC12O95881 172 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 HLA-HP01893 362 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 CRHBPP24387 322 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 CD40P25942 277 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 POLR2IP36954 125 aaKnown RBP13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 CXCR4P61073 352 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 RAP1BP61224 184 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 RAP1AP62834 184 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 PIGFQ07326 219 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 NPRL3Q12980 569 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 C10orf128Q5T292 105 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 FAM205BPQ63HN1 556 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 MYPOPQ86VE0 399 aaPredicted RBP13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 SKA3Q8IX90 412 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 FOXN4Q96NZ1 517 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 TSC22D3Q99576 134 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 SH3GL3Q99963 347 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 ALG12Q9BV10 488 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 SEC61A2Q9H9S3 476 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 GMPPBQ9Y5P6 360 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 ATP23Q9Y6H3 246 aa13.66□□□□□ -0.22
CLK3P2-201ENST00000427566 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
CLK3P2-201ENST00000427566 ARPC4-TTLL3A0A0A6YYG9 625 aa13.65□□□□□ -0.22
CLK3P2-201ENST00000427566 SHISA9B4DS77 424 aa13.65□□□□□ -0.22
CLK3P2-201ENST00000427566 DCTN6O00399 190 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms