RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 ERVS71-1P61550 626 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 TOP3AQ13472 1001 aaPredicted RBP17.12■□□□□ 0.33
CCDC107-206ENST00000426546 TRAM2Q15035 370 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 PCGF3Q3KNV8 242 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 THEM4Q5T1C6 240 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 FAM27BQ5VT28 67 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 TMEM154Q6P9G4 183 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 SLC25A47Q6Q0C1 308 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 VTCN1Q7Z7D3 282 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 SLC15A3Q8IY34 581 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 CPEB3Q8NE35 698 aaKnown RBP17.12■□□□□ 0.33
CCDC107-206ENST00000426546 CLDND2Q8NHS1 167 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
CCDC107-206ENST00000426546 YIPF5Q969M3 257 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 FNDC11Q9BVV2 318 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 MAN2C1Q9NTJ4 1040 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 NKIRAS2Q9NYR9 191 aa17.12■□□□□ 0.33
CCDC107-206ENST00000426546 TMEFF2Q9UIK5 374 aaPredicted RBP17.12■□□□□ 0.33
CCDC107-206ENST00000426546 TFP02787 698 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 SAGP10523 405 aaPredicted RBP17.11■□□□□ 0.33
CCDC107-206ENST00000426546 ZNF32P17041 273 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 MAKP20794 623 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 STOMP27105 288 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 LIPEQ05469 1076 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 SGCAQ16586 387 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 MOGQ16653 247 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 ALKBH6Q3KRA9 238 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 UNQ6126/PRO20091Q6UXV3 157 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 RNF113BQ8IZP6 322 aaKnown RBP17.11■□□□□ 0.33
CCDC107-206ENST00000426546 LRRC75AQ8NAA5 344 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 NSMAFQ92636 917 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 POM121L2Q96KW2 1035 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 TSPAN32Q96QS1 320 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 RBP7Q96R05 134 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 HOPXQ9BPY8 73 aaPredicted RBP17.11■□□□□ 0.33
CCDC107-206ENST00000426546 SNX13Q9Y5W8 968 aa17.11■□□□□ 0.33
CCDC107-206ENST00000426546 A6NIZ1 184 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 J3KTA2 159 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 EBAG9O00559 213 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 CXCR6O00574 342 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 NME4O00746 187 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 FFAR1O14842 300 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 ZNF682O95780 498 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 IGHV3-13P01766 116 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 MT-ND5P03915 603 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 FUT4P22083 530 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 MAGEB1P43366 347 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 YAP1P46937 504 aaKnown RBP17.1■□□□□ 0.33
CCDC107-206ENST00000426546 SLC9A3P48764 834 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 CTXN1P60606 82 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 RAP1BP61224 184 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 RAP1AP62834 184 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 CCL8P80075 99 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 PRKCDQ05655 676 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 GABPB1Q06547 395 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-206ENST00000426546 FHL1Q13642 323 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 C8orf82Q6P1X6 216 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-206ENST00000426546 FOXL2NBQ6ZUU3 175 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 CBLL1Q75N03 491 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 OAFQ86UD1 273 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 NRMQ8IXM6 262 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 ICA1LQ8NDH6 482 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 OR1J1Q8NGS3 322 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 ACOT11Q8WXI4 607 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-206ENST00000426546 GMPR2Q9P2T1 348 aaKnown RBP17.1■□□□□ 0.33
CCDC107-206ENST00000426546 RHCGQ9UBD6 479 aa17.1■□□□□ 0.33
CCDC107-206ENST00000426546 TRAV27A0A087WT01 109 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 EFCAB9A8MZ26 197 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 GSTA4O15217 222 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 PPIHO43447 177 aaKnown RBP17.09■□□□□ 0.33
CCDC107-206ENST00000426546 CST2P09228 141 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 GUCA1AP43080 201 aaPredicted RBP17.09■□□□□ 0.33
CCDC107-206ENST00000426546 SLC7A2P52569 658 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 ERVK-25P63136 954 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 IFI44LQ53G44 452 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 C16orf89Q6UX73 402 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 RINLQ6ZS11 566 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 IGFN1Q86VF2 1251 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 GLCCI1Q86VQ1 547 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 C1orf174Q8IYL3 243 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 FAM156AQ8NDB6 213 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 OR51A7Q8NH64 312 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 NARFLQ9H6Q4 476 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 NDE1Q9NXR1 346 aa17.09■□□□□ 0.33
CCDC107-206ENST00000426546 EIF3KQ9UBQ5 218 aaKnown RBP17.09■□□□□ 0.33
CCDC107-206ENST00000426546 LOC100509620A0A075B734 347 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 A0A087WUU8 490 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 C5orf49A4QMS7 147 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 ICMTO60725 284 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 PRSS23O95084 383 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 CCNOP22674 350 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 WNT5AP41221 380 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 GDI2P50395 445 aaKnown RBP17.08■□□□□ 0.32
CCDC107-206ENST00000426546 PCBD1P61457 104 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 PSG4Q00888 419 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 TEKQ02763 1124 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 BNIP1Q12981 228 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 ZNF718Q3SXZ3 478 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 ZNF730Q6ZMV8 503 aa17.08■□□□□ 0.32
CCDC107-206ENST00000426546 FKBP9P1Q75LS8 142 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms