RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MYBPHQ13203 477 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 CDONQ4KMG0 1287 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 C4orf17Q53FE4 359 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 FAM205BPQ63HN1 556 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 SEM1Q6ZVN7 128 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 ZBTB46Q86UZ6 589 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 MINDY2Q8NBR6 621 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 C4orf36Q96KX1 117 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TSPAN32Q96QS1 320 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TBX5Q99593 518 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TM9SF2Q99805 663 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TTYH2Q9BSA4 534 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 SNTG1Q9NSN8 517 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 ERRFI1Q9UJM3 462 aaPredicted RBP13.89□□□□□ -0.19
SHOX2-202ENST00000425436 TMEM14AQ9Y6G1 99 aa13.89□□□□□ -0.19
SHOX2-202ENST00000425436 DIDO1Q9BTC0 2240 aaKnown RBP13.88□□□□□ -0.19
SHOX2-202ENST00000425436 E9PLN8 166 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 LOC110117498-PIK3R3F6TDL0 507 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 J3QLW9 94 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 J3QRK9 145 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 PHYHO14832 338 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 TGM6O95932 706 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 GLI4P10075 376 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 ZNF19P17023 458 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 CD79BP40259 229 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 RGS21Q2M5E4 152 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
SHOX2-202ENST00000425436 OR6K6Q8NGW6 343 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 SLC25A43Q8WUT9 341 aaPredicted RBP13.88□□□□□ -0.19
SHOX2-202ENST00000425436 ROBO4Q8WZ75 1007 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 TRMT61AQ96FX7 289 aaKnown RBP13.88□□□□□ -0.19
SHOX2-202ENST00000425436 DMRTA2Q96SC8 542 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 VKORC1Q9BQB6 163 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 TMED9Q9BVK6 235 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
SHOX2-202ENST00000425436 UGT2A1Q9Y4X1 527 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 FKBP7Q9Y680 259 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 MED12LQ86YW9 2145 aa13.88□□□□□ -0.19
SHOX2-202ENST00000425436 GCN1Q92616 2671 aaKnown RBP13.87□□□□□ -0.19
SHOX2-202ENST00000425436 IGHV3-15A0A0B4J1V0 119 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 ISPDA4D126 451 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 FTCDNL1E5RQL4 147 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 SULT2B1O00204 365 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 GABRPO00591 440 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 OGG1O15527 345 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 FZD7O75084 574 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 HOXD4P09016 255 aaPredicted RBP13.87□□□□□ -0.19
SHOX2-202ENST00000425436 KLK2P20151 261 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 AHCYP23526 432 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 PTGER4P35408 488 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 SRSF1Q07955 248 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHOX2-202ENST00000425436 PDSS1Q5T2R2 415 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 LINC01590Q5TEZ4 76 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 EEF1A1P5Q5VTE0 462 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 NSUN5P2Q63ZY6 315 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 RPL22L1Q6P5R6 122 aaKnown RBP13.87□□□□□ -0.19
SHOX2-202ENST00000425436 PLEKHG7Q6ZR37 379 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 TMPPEQ6ZT21 453 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 ADGRE4PQ86SQ3 457 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 C9orf106Q8NAJ2 232 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 FNDC9Q8TBE3 224 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 PHYHIPQ92561 330 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 CCDC120Q96HB5 630 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 CALHM2Q9HA72 323 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 FANCFQ9NPI8 374 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 SLC5A6Q9Y289 635 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 B3GALT5Q9Y2C3 310 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 HELZ2Q9BYK8 2649 aaKnown RBP13.87□□□□□ -0.19
SHOX2-202ENST00000425436 DOCK7Q96N67 2140 aa13.87□□□□□ -0.19
SHOX2-202ENST00000425436 SLC22A20A6NK97 555 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 HSPB2A8KAH6 182 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 CASKO14936 926 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 ARHGEF9O43307 516 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 TOXO94900 526 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 IMPDH2P12268 514 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 CRABP1P29762 137 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 PYCR1P32322 319 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 SDC2P34741 201 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 ACVR1BP36896 505 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 MTNR1BP49286 362 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 DAP3P51398 398 aaKnown RBP13.86□□□□□ -0.19
SHOX2-202ENST00000425436 OR2B6P58173 313 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 OR12D2P58182 307 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 SIRPAP78324 504 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 PUDPQ08623 228 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 SF3B4Q15427 424 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHOX2-202ENST00000425436 HSPB2Q16082 182 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 ZNF181Q2M3W8 571 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 MESTQ5EB52 335 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 DMKNQ6E0U4 476 aaPredicted RBP13.86□□□□□ -0.19
SHOX2-202ENST00000425436 P4HA3Q7Z4N8 544 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 TPRA1Q86W33 373 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 ZFP41Q8N8Y5 198 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 ADPRHL1Q8NDY3 354 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
SHOX2-202ENST00000425436 HDHD5Q9BXW7 423 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms