RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF684Q5T5D7 378 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 NHLRC1Q6VVB1 395 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 GRINAQ7Z429 371 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 CPEB2Q7Z5Q1 589 aaKnown RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 OR4S1Q8NGB4 309 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 AKAP1Q92667 903 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 SLC25A44Q96H78 314 aaPredicted RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 UCN2Q96RP3 112 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 MARVELD1Q9BSK0 173 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 VSX1Q9NZR4 365 aaPredicted RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 MYOTQ9UBF9 498 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF69Q9UC07 566 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PPIEQ9UNP9 301 aaKnown RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 TMEM269A0A1B0GVZ9 245 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 RER1O15258 196 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 HTR2BP41595 481 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PNLIPRP2P54317 469 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 LINC00303Q3SY05 128 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 TPRA1Q86W33 373 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 BPHLQ86WA6 291 aaPredicted RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PIAS4Q8N2W9 510 aaPredicted RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 FGGYQ96C11 551 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PELOQ9BRX2 385 aaKnown RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 JAM3Q9BX67 310 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 DPAGT1Q9H3H5 408 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 PTGES2Q9H7Z7 377 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF160Q9HCG1 818 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 CDV3Q9UKY7 258 aaKnown RBP10.68□□□□□ -0.7
PTPRN-204ENST00000423636 MGAT4AQ9UM21 535 aa10.68□□□□□ -0.7
PTPRN-204ENST00000423636 ADGRG4Q8IZF6 3080 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 PLATP00750 562 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 ALDOBP05062 364 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 FAPQ12884 760 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 GGTLC2Q14390 218 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 SLC17A1Q14916 467 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 C2orf76Q3KRA6 126 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 TMED4Q7Z7H5 227 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 EDAQ92838 391 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 FAM71F1Q96KD3 344 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 RASL10BQ96S79 203 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 CHST6Q9GZX3 395 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 METTL17Q9H7H0 456 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 HRASLSQ9HDD0 168 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 SLC23A1Q9UHI7 598 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 AIPO00170 330 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 UBL3O95164 117 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 H2AFB2P0C5Z0 115 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 PTH2RP49190 550 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 STARP49675 285 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 ZNF41P51814 821 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 AP2S1P53680 142 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 EPHA4P54764 986 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 HSF1Q00613 529 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 CDK10Q15131 360 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 SGCBQ16585 318 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 SGCAQ16586 387 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 NUP54Q7Z3B4 507 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 DND1Q8IYX4 353 aaKnown RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 NFAM1Q8NET5 270 aaPredicted RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 OR8H1Q8NGG4 311 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 OR13C3Q8NGS6 347 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 CREB3L1Q96BA8 519 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 S100A16Q96FQ6 103 aaKnown RBP10.67□□□□□ -0.7
PTPRN-204ENST00000423636 C4orf45Q96LM5 186 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 OR51J1Q9H342 316 aa10.67□□□□□ -0.7
PTPRN-204ENST00000423636 A0A0G2JMM0 328 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 A0A1W2PP11 408 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 A0A1W2PPB8 328 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 A0A1W2PRS3 328 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 KIR3DP1A8MWS1 328 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ADAM10O14672 748 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 WDPCPO95876 746 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CCL3P10147 92 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ABOP16442 354 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 TAS2R20P59543 309 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 RAET1LQ5VY80 246 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CD163Q86VB7 1156 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 CHST4Q8NCG5 386 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 GPR148Q8TDV2 347 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 TXNIPQ9H3M7 391 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ING3Q9NXR8 418 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 COQ3Q9NZJ6 369 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ASH2LQ9UBL3 628 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 FOXJ3Q9UPW0 622 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 DHDHQ9UQ10 334 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 PCDHGA5Q9Y5G8 931 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 B3GALT1Q9Y5Z6 326 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 MRPS18BQ9Y676 258 aaKnown RBP10.66□□□□□ -0.7
PTPRN-204ENST00000423636 IGLV1-36A0A0B4J1U3 117 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 NUDT1P36639 197 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 DNASE1L1P49184 302 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 ART1P52961 327 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 SCGB2B2Q4G0G5 96 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 YIF1BQ5BJH7 314 aa10.66□□□□□ -0.7
PTPRN-204ENST00000423636 C9orf135Q5VTT2 229 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms