RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 H3BSA7 217 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 HAX1O00165 279 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 WNT9BO14905 357 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 TPD52L2O43399 206 aaKnown RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ICMTO60725 284 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CDC14BO60729 498 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 KRT34O76011 436 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CST2P09228 141 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ANPEPP15144 967 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ITGA2P17301 1181 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CCNOP22674 350 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 GCH1P30793 250 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 WNT5AP41221 380 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 GUCA1AP43080 201 aaPredicted RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CRYBB2P43320 205 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF81P51508 661 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 LMO4P61968 165 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 SELENOWP63302 87 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 GLO1Q04760 184 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 TRAM2Q15035 370 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 SGCAQ16586 387 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF718Q3SXZ3 478 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ZMAT1Q5H9K5 638 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 THEM4Q5T1C6 240 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM27BQ5VT28 67 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 MBNL2Q5VZF2 373 aaKnown RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CGB2Q6NT52 195 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 SLC25A47Q6Q0C1 308 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 FOXL2NBQ6ZUU3 175 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 USP51Q70EK9 711 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 NRMQ8IXM6 262 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF101Q8IZC7 436 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 GEMIN6Q8WXD5 167 aaKnown RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 RCN3Q96D15 328 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ELMOD3Q96FG2 381 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 TIMD4Q96H15 378 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 RBP7Q96R05 134 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 FNDC11Q9BVV2 318 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 OR2H1Q9GZK4 316 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 METTL17Q9H7H0 456 aaPredicted RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ZNF665Q9H7R5 613 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 LPAR2Q9HBW0 351 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CYSLTR2Q9NS75 346 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 CGGBP1Q9UFW8 167 aaPredicted RBP9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 ANK2Q01484 3957 aa9.85□□□□□ -0.83
SQSTM1-203ENST00000422245 NBEAL1Q6ZS30 2694 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 LOC100509620A0A075B734 347 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 PLSCR5A0PG75 271 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 EFCAB9A8MZ26 197 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 PNPP00491 289 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 MSR1P21757 451 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 SLC9A3P48764 834 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 CTXN1P60606 82 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 ERVK-25P63136 954 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 PSG4Q00888 419 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 HFEQ30201 348 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 AVPI1Q5T686 147 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 RFPL4BQ6ZWI9 263 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 MEX3DQ86XN8 651 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 ALDH16A1Q8IZ83 802 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 LRRC75AQ8NAA5 344 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 FAM156AQ8NDB6 213 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 AKR7LQ8NHP1 331 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 ZFAND2BQ8WV99 257 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 IPCEF1Q8WWN9 437 aaPredicted RBP9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 MARS2Q96GW9 593 aaKnown RBP9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 LRRC37BQ96QE4 947 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 NDEL1Q9GZM8 345 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 WNT5BQ9H1J7 359 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 MAN2C1Q9NTJ4 1040 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 CMTM6Q9NX76 183 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 TIMM10BQ9Y5J6 103 aa9.84□□□□□ -0.83
SQSTM1-203ENST00000422245 TRAV27A0A087WT01 109 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 A0A0G2JMP0 313 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 A0A0X1KG70 313 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 A0A1W2PPL8 197 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 C12orf71A8MTZ7 269 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ZNF682O95780 498 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 IGHV1-46P01743 117 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ADH4P08319 380 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 MAKP20794 623 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 LAP3P28838 519 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 LIPAP38571 399 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 MPV17P39210 176 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 MMP15P51511 669 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ARHGDIAP52565 204 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 MVKQ03426 396 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 PRKCDQ05655 676 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 SLC3A1Q07837 685 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 SF3A3Q12874 501 aaKnown RBP eCLIP9.83□□□□□ -0.841e-6■■■□□ 15.3
SQSTM1-203ENST00000422245 TSTQ16762 297 aaKnown RBP9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 IFI44LQ53G44 452 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 SPATA46Q5T0L3 261 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ACSM5Q6NUN0 579 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 ARL9Q6T311 187 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 VTCN1Q7Z7D3 282 aa9.83□□□□□ -0.84
SQSTM1-203ENST00000422245 SYT9Q86SS6 491 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms