RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 LRMDAQ9H2I8 198 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 KRCC1Q9NPI7 259 aaPredicted RBP12.75□□□□□ -0.37
LINC01840-201ENST00000421870 AURKCQ9UQB9 309 aa12.75□□□□□ -0.37
LINC01840-201ENST00000421870 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 XKRYO14609 159 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 CD5LO43866 347 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 KRT36O76013 467 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 TXNDC12O95881 172 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 SCG5P05408 212 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 ADRA2AP08913 450 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 APEHP13798 732 aaKnown RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 ZNF250P15622 560 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 STOMP27105 288 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 APEX1P27695 318 aaKnown RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 GUCA1AP43080 201 aaPredicted RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 ENDOGQ14249 297 aaKnown RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 RFX4Q33E94 735 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 C1orf94Q6P1W5 598 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 SMARCD3Q6STE5 483 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 ZDHHC21Q8IVQ6 265 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 RSRC1Q96IZ7 334 aaKnown RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 ZNF570Q96NI8 536 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 FOXN4Q96NZ1 517 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 MUC13Q9H3R2 512 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 CDH20Q9HBT6 801 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 CCNB1IP1Q9NPC3 277 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
LINC01840-201ENST00000421870 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 TIMM10BQ9Y5J6 103 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 TLN2Q9Y4G6 2542 aa12.74□□□□□ -0.37
LINC01840-201ENST00000421870 IGLV3-9A0A075B6K5 115 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 LOC100509620A0A075B734 347 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 H7C1C5 153 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 IMPA2O14732 288 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 TLX2O43763 284 aaPredicted RBP12.73□□□□□ -0.37
LINC01840-201ENST00000421870 ICMTO60725 284 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 ERCC1P07992 297 aaPredicted RBP12.73□□□□□ -0.37
LINC01840-201ENST00000421870 FAM157BP0CG42 384 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 GIFP27352 417 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 RRM2P31350 389 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 APLNRP35414 380 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 NR4A2P43354 598 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 MAGEA2P43356 314 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 GSSP48637 474 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 PCBD1P61457 104 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 LCN6P62502 163 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 MS4A2Q01362 244 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 SPIBQ01892 262 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 HSF2Q03933 536 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 LCN8Q6JVE9 175 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 RGS7BPQ6MZT1 257 aaPredicted RBP12.73□□□□□ -0.37
LINC01840-201ENST00000421870 CYP2R1Q6VVX0 501 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 ALDH16A1Q8IZ83 802 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 ZNF786Q8N393 782 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 SYT3Q9BQG1 590 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 BCL2L14Q9BZR8 327 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 OR2H1Q9GZK4 316 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 POLE4Q9NR33 117 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
LINC01840-201ENST00000421870 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 DUSP13Q9UII6 198 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
LINC01840-201ENST00000421870 IER3IP1Q9Y5U9 82 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
LINC01840-201ENST00000421870 TEX13CA0A0J9YWL9 993 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 A0A1W2PPL8 197 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 M0R233 179 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 ARPC3O15145 178 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 STAMBPO95630 424 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 TP53P04637 393 aaPredicted RBP12.72□□□□□ -0.37
LINC01840-201ENST00000421870 DAOP14920 347 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 CTLA4P16410 223 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 ATP6V1B2P21281 511 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 MSR1P21757 451 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 USF1P22415 310 aaPredicted RBP12.72□□□□□ -0.37
LINC01840-201ENST00000421870 FPR3P25089 353 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 IFNGR2P38484 337 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 CDKN2AP42771 156 aaKnown RBP12.72□□□□□ -0.37
LINC01840-201ENST00000421870 RPS6KA3P51812 740 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 KRR1Q13601 381 aaKnown RBP12.72□□□□□ -0.37
LINC01840-201ENST00000421870 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 ADCK1Q86TW2 530 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 ZNF540Q8NDQ6 660 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 AKR7LQ8NHP1 331 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 SYNPRQ8TBG9 265 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 UBASH3BQ8TF42 649 aa12.72□□□□□ -0.37
LINC01840-201ENST00000421870 C11orf40Q8WZ69 217 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms