RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 RPL27P61353 136 aaKnown RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 C2orf68Q2NKX9 166 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 ELMOD2Q8IZ81 293 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 CASTOR1Q8WTX7 329 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 ADAMTS14Q8WXS8 1223 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 FAM3DQ96BQ1 224 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 SEC22AQ96IW7 307 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 GTPBP2Q9BX10 602 aaKnown RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 LRP12Q9Y561 859 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 GLULP15104 373 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 POU3F2P20265 443 aaPredicted RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 LCN1P31025 176 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 GRK1Q15835 563 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 SLC18B1Q6NT16 456 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 BATF2Q8N1L9 274 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 EID2Q8N6I1 236 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 OR4C16Q8NGL9 310 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 OR13C9Q8NGT0 318 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 COQ8AQ8NI60 647 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 FGGYQ96C11 551 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 SCMH1Q96GD3 660 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 FAM71F1Q96KD3 344 aaPredicted RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 UBL7Q96S82 380 aaPredicted RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 CRB3Q9BUF7 120 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 ELL3Q9HB65 397 aaPredicted RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF224Q9NZL3 707 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
MCF2L-213ENST00000421756 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
MCF2L-213ENST00000421756 FRG2CA6NGY1 282 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 GOSR2O14653 212 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 SIGLEC5O15389 551 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 GPRIN2O60269 458 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 IGKV3-11P04433 115 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 RIDAP52758 137 aaKnown RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 SIGLEC14Q08ET2 396 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 TAF13Q15543 124 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 LGALSLQ3ZCW2 172 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 CDC20BQ86Y33 519 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 OR1N1Q8NGS0 311 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 MSANTD3Q96H12 275 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 ZC3HAV1LQ96H79 300 aaKnown RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 PDGFBP01127 241 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 MFAP5Q13361 173 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 MOGAT2Q3SYC2 334 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 NKAIN1Q4KMZ8 207 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 TMEM225Q6GV28 225 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 OR52W1Q6IF63 320 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 NUP54Q7Z3B4 507 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 CMIPQ8IY22 773 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.99□□□□□ -0.499e-7■■■■□ 19.3
MCF2L-213ENST00000421756 DSPP15924 2871 aaKnown RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 ZSCAN5BA6NJL1 495 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 NUPL2O15504 423 aaKnown RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 RAMP1O60894 148 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 SPINK2P20155 84 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 CAPZA2P47755 286 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 EEF1A1P5Q5VTE0 462 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 BIVMQ86UB2 503 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 BPHLQ86WA6 291 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 GVQW1Q8N7I0 195 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 LRRC75AQ8NAA5 344 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF680Q8NEM1 530 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 OR10H5Q8NGA6 315 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 C4orf45Q96LM5 186 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 TINAGL1Q9GZM7 467 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-213ENST00000421756 LAT2Q9GZY6 243 aa11.99□□□□□ -0.49
MCF2L-213ENST00000421756 LILRA5A6NI73 299 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 BGLAPP02818 100 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 H2BFMP0C1H6 154 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 TRAPPC2P0DI81 140 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 TRAPPC2BP0DI82 140 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF250P15622 560 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 AFF3P51826 1226 aaKnown RBP11.98□□□□□ -0.49
MCF2L-213ENST00000421756 EMP2P54851 167 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 IGLV3-21P80748 117 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-213ENST00000421756 GLO1Q04760 184 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 SLC22A10Q63ZE4 541 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 DIABLOQ9NR28 239 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 DLL4Q9NR61 685 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 TCRBV16S1A1N1A0A5B0 115 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 CALCBP10092 127 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 PUDPQ08623 228 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 RAB11BQ15907 218 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 TMEM176BQ3YBM2 270 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-213ENST00000421756 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF574Q6ZN55 896 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF101Q8IZC7 436 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
MCF2L-213ENST00000421756 ZNF436Q9C0F3 470 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms