RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LILRB1Q8NHL6 650 aaPredicted RBP17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 AKAP1Q92667 903 aaKnown RBP eCLIP17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 STMN2Q93045 179 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 FOXN4Q96NZ1 517 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 RACGAP1Q9H0H5 632 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 KCNN2Q9H2S1 579 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 LIME1Q9H400 295 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 UBTD1Q9HAC8 227 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 CMC2Q9NRP2 79 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 FBXL3Q9UKT7 428 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 B9D1Q9UPM9 204 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 FKBP7Q9Y680 259 aa17.94■□□□□ 0.46
HMGXB4-203ENST00000420166 PDZD2O15018 2839 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ERICH4A6NGS2 130 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 RIIAD1A6NNX1 92 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ATP6V1G2-DDX39BF2Z307 99 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 MITFO75030 526 aaPredicted RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 IFNGP01579 166 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 SCG5P05408 212 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CST2P09228 141 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 MMP7P09237 267 aaPredicted RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF14P17017 642 aaPredicted RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CDH11P55287 796 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CDK5Q00535 292 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CRMP1Q14194 572 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ENDOGQ14249 297 aaKnown RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF672Q499Z4 452 aaPredicted RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ACSM5Q6NUN0 579 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 ZBTB46Q86UZ6 589 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 NEUROG1Q92886 237 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 FBXO17Q96EF6 278 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 KCNS3Q9BQ31 491 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 RNF121Q9H920 327 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 SLC25A19Q9HC21 320 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 SRA1Q9HD15 236 aaKnown RBP17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 EMC7Q9NPA0 242 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CCNB1IP1Q9NPC3 277 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 MOKQ9UQ07 419 aa17.93■□□□□ 0.46
HMGXB4-203ENST00000420166 CRYAAP02489 173 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 IGFBP5P24593 272 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 CRISP1P54107 249 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 ESRRGP62508 458 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 PPP2R2BQ00005 443 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 DBPQ10586 325 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 RAB39AQ14964 217 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 PAMR1Q6UXH9 720 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 CDH24Q86UP0 819 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 DEPDC4Q8N2C3 294 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 PQLC1Q8N2U9 271 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 MS4A3Q96HJ5 214 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 RBM4Q9BWF3 364 aaKnown RBP17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF416Q9BWM5 594 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 OSBPL10Q9BXB5 764 aa17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 TMEFF2Q9UIK5 374 aaPredicted RBP17.92■□□□□ 0.46
HMGXB4-203ENST00000420166 IGHV2OR16-5A0A0B4J2B6 119 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 C12orf71A8MTZ7 269 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 MPZL1O95297 269 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 HMGN1P05114 100 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 SERPINA5P05154 406 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 GAAP10253 952 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF3P17036 446 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF32P17041 273 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 CALCRP30988 508 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 CENPAP49450 140 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 PCBD1P61457 104 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 KCNMB1Q16558 191 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 UGT2A3Q6UWM9 527 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 B3GLCTQ6Y288 498 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF584Q8IVC4 421 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 IL17RDQ8NFM7 739 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 OR2T4Q8NH00 348 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 C11orf40Q8WZ69 217 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 FBXW5Q969U6 566 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 CIB1Q99828 191 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 RBM4BQ9BQ04 359 aaKnown RBP17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 NMNAT2Q9BZQ4 307 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 ST6GALNAC2Q9UJ37 374 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 POU2F3Q9UKI9 436 aa17.91■□□□□ 0.46
HMGXB4-203ENST00000420166 CCDC168Q8NDH2 2452 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 GPANK1O95872 356 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 PYCR1P32322 319 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 SLC25A1P53007 311 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 LSM6P62312 80 aaKnown RBP17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 GLO1Q04760 184 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 PABPC1L2AQ5JQF8 200 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 TMEM236Q5W0B7 351 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 C20orf204Q6ZNR8 217 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 ZNF611Q8N823 705 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 SLC26A10Q8NG04 563 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 OR9Q1Q8NGQ5 310 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 WACQ9BTA9 647 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 ENOPH1Q9UHY7 261 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 EDARQ9UNE0 448 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 ATP23Q9Y6H3 246 aa17.9■□□□□ 0.46
HMGXB4-203ENST00000420166 MAST4O15021 2626 aa17.89■□□□□ 0.46
HMGXB4-203ENST00000420166 FAM171A2A8MVW0 826 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 SURF4O15260 269 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 RAF1P04049 648 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 PSG4Q00888 419 aa17.89■□□□□ 0.45
HMGXB4-203ENST00000420166 HSF2Q03933 536 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms