RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DYNC1I1O14576 645 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 TMCC2O75069 709 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 OR6A2O95222 327 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF682O95780 498 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 SERPINA1P01009 418 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 MT-ND1P03886 318 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 SOD3P08294 240 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ASAH2BP0C7U1 165 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 DANCRP0C864 163 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ADORA3P0DMS8 318 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 THRBP10828 461 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 UMPSP11172 480 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 CD99P14209 185 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PTAFRP25105 342 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 RBM34P42696 430 aaKnown RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PTH2RP49190 550 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 UGT2B15P54855 530 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 SH3BGRP55822 239 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PSME3P61289 254 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 RPS4XP62701 263 aaKnown RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ARF1P84077 181 aaKnown RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PGGHGQ32M88 737 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 CD300EQ496F6 205 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 IFI44LQ53G44 452 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PHYHD1Q5SRE7 291 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 C1QTNF12Q5T7M4 302 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 CARD17Q5XLA6 110 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ANKRD16Q6P6B7 361 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 B3GLCTQ6Y288 498 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 NANOGNBQ7Z5D8 188 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PXKQ7Z7A4 578 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PIGWQ7Z7B1 504 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 VTCN1Q7Z7D3 282 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 C20orf196Q8IYI0 205 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 OFCC1Q8IZS5 231 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 GPR137CQ8N3F9 429 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 LRRC17Q8N6Y2 441 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 PFN4Q8NHR9 129 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 MAGEE2Q8TD90 523 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 SMAP2Q8WU79 429 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 TMEM239Q8WW34 195 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 GEMIN6Q8WXD5 167 aaKnown RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 BCL2L2Q92843 193 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 DVL3Q92997 716 aaPredicted RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 TXNDC15Q96J42 360 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 RADILQ96JH8 1075 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 EMC6Q9BV81 110 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 WDR12Q9GZL7 423 aaKnown RBP6.02□□□□□ -1.45
HMGN1-205ENST00000419378 CXorf56Q9H5V9 222 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 CRLF2Q9HC73 371 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 NANSQ9NR45 359 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 C20orf141Q9NUB4 165 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF229Q9UJW7 825 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 POU2F3Q9UKI9 436 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 A4GNTQ9UNA3 340 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 MGAT4BQ9UQ53 548 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 LAMP3Q9UQV4 416 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 LRCH1Q9Y2L9 728 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ARL2BPQ9Y2Y0 163 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 NOX1Q9Y5S8 564 aa6.02□□□□□ -1.45
HMGN1-205ENST00000419378 ZANQ9Y493 2812 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ARPC4-TTLL3A0A0A6YYG9 625 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 GAGE12BA1L429 117 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 MARCH11A6NNE9 402 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF99A8MXY4 864 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 E7EQL1 145 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ATP6V1G2-DDX39BF2Z307 99 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 J3KTA2 159 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ARHGEF9O43307 516 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 PIP5K1CO60331 668 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 DCTN3O75935 186 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SEC14L2O76054 403 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 OR7A10O76100 309 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 IGF2P01344 180 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 HIST1H2ABP04908 130 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 IFNW1P05000 195 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 PAX1P15863 534 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 NCK1P16333 377 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 YAP1P46937 504 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 BIDP55957 195 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 UBE2NP61088 152 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 TUBA1BP68363 451 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 TUBA4AP68366 448 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 RPL18Q07020 188 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ST3GAL3Q11203 375 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ZP4Q12836 540 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 DYRK1AQ13627 763 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 MELKQ14680 651 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 CEACAM16Q2WEN9 425 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SHEQ5VZ18 495 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SLC22A25Q6T423 547 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 TUBA1AQ71U36 451 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SLC35D2Q76EJ3 337 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 HIST3H2AQ7L7L0 130 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 YTHDF3Q7Z739 585 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 RNF148Q8N7C7 305 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 RBM15BQ8NDT2 890 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 OR6N1Q8NGY5 312 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 IPCEF1Q8WWN9 437 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms