RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CKLFQ9UBR5 152 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 NOP16Q9Y3C1 178 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 LAMA1P25391 3075 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CSF2RBP32927 897 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 SKP1P63208 163 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 SPOCK1Q08629 439 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 EIF2B5Q13144 721 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CD163Q86VB7 1156 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 OR1J2Q8NGS2 313 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CCDC107Q8WV48 283 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 TAS2R4Q9NYW5 299 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 FITM1A5D6W6 292 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC17A2O00624 439 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ALOX12BO75342 701 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 SNAPC5O75971 98 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 CYB5AP00167 134 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 FGF2P09038 288 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ACTBP60709 375 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ACTG1P63261 375 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ADAM8P78325 824 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF273Q14593 569 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF615Q8N8J6 731 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM131CQ96AQ9 280 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 TAS2R3Q9NYW6 316 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 UPB1Q9UBR1 384 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 PRODH2Q9UF12 536 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 WDR87Q6ZQQ6 2873 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC25A12O75746 678 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 DMWDQ09019 674 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 FUT7Q11130 342 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC17A1Q14916 467 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 RTN4RQ9BZR6 473 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 MRTO4Q9UKD2 239 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 B9D1Q9UPM9 204 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 PLEKHA6Q9Y2H5 1048 aa13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM184BQ9Y519 407 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-203ENST00000419007 CD2P06729 351 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 NAGAP17050 411 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 CSRP1P21291 193 aaKnown RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TAS2R19P59542 299 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 MFGE8Q08431 387 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 UBXN2BQ14CS0 331 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 DNM1P46Q6ZS02 220 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 PRSS58Q8IYP2 241 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 PXT1Q8NFP0 134 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 OR4S1Q8NGB4 309 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 OR51A2Q8NGJ7 313 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TOE1Q96GM8 510 aaKnown RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF578Q96N58 590 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 MNTQ99583 582 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 AIFM2Q9BRQ8 373 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 COL6A3P12111 3177 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 KIR2DS5A0A0G2JLQ3 304 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 A0A0G2JNG1 304 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 KIR2DS3K7RE56 304 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TOR1AO14656 332 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 IFI6P09912 130 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 HTR2CP28335 458 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 KIR2DS5Q14953 304 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 KDM8Q8N371 416 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 GPBAR1Q8TDU6 330 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ST8SIA2Q92186 375 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 SEH1LQ96EE3 360 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 OR8B4Q96RC9 309 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 COMMD9Q9P000 198 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM235A6NFC5 223 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 RFPL4AA6NLU0 287 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 RFPL4AL1F8VTS6 287 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ICOSLGO75144 302 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 CTHP32929 405 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ACKR1Q16570 336 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 GLT8D1Q68CQ7 371 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM225Q6GV28 225 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC18B1Q6NT16 456 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 LRFN4Q6PJG9 635 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 BPIFB2Q8N4F0 458 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ACBD4Q8NC06 268 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 ASB12Q8WXK4 309 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 MED9Q9NWA0 146 aa13.68□□□□□ -0.22
SEMA3B-203ENST00000419007 OR5H14A6NHG9 310 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF736B4DX44 427 aaPredicted RBP13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 WISP1O95388 367 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 PMS2P2O95744 297 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms