RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ACTR6Q9GZN1 396 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MED28Q9H204 178 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CXCL16Q9H2A7 254 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SPNS1Q9H2V7 528 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 RIMS4Q9H426 269 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 TPT1P8Q9HAU6 139 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC25A19Q9HC21 320 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ABCB9Q9NP78 766 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FGF20Q9NP95 211 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 C12orf4Q9NQ89 552 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ZC4H2Q9NQZ6 224 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PLSCR3Q9NRY6 295 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DNAJC11Q9NVH1 559 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MED9Q9NWA0 146 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TXNL4BQ9NX01 149 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 LYARQ9NX58 379 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 MAT2BQ9NZL9 334 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 IL17CQ9P0M4 197 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 VPS29Q9UBQ0 182 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4Q9UBX2 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 UBQLN2Q9UHD9 624 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ATP6V1HQ9UI12 483 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MUTYHQ9UIF7 546 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 KIF25Q9UIL4 384 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CRLS1Q9UJA2 301 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ELF5Q9UKW6 265 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 DIMT1Q9UNQ2 313 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 GINS2Q9Y248 185 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 NCKAP1Q9Y2A7 1128 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 EXOSC1Q9Y3B2 195 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 Q9Y3F1 56 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HSPB11Q9Y547 144 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MAB21L2Q9Y586 359 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 NUBP2Q9Y5Y2 271 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ALG5Q9Y673 324 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 POMT1Q9Y6A1 747 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ENPP4Q9Y6X5 453 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 U3KQ87 197 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 THSD7BQ9C0I4 1608 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 IGLV7-46A0A075B6I9 117 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 IGKV3D-15A0A087WSY6 115 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 KCNE1BA0A087WTH5 132 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 TRBV4-1A0A0J9YWV2 114 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GLYATL1P3A0A0U1RQE8 302 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A0U1RQS6 177 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A0X1KG70 313 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A1B0GTQ1 180 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TRDV1A0A1B0GX56 115 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A1W2PQ67 120 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A1W2PR80 420 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 A0A1W2PRG6 482 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 C7orf66A4D0T2 115 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 MGAT4DA6NG13 374 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ARL5CA6NH57 179 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ANKDD1BA6NHY2 528 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 WASHC1A8K0Z3 465 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TMEM150CB9EJG8 249 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 H0YIV9 168 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 I3L521 148 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FOXE1O00358 373 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 KPNA3O00505 521 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 SLC9A3R1O14745 358 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 CASKO14936 926 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PLA2G10O15496 165 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 OR1I1O60431 355 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ACSL4O60488 711 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TBX19O60806 448 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PRAF2O60831 178 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ENTPD6O75354 484 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 B3GAT3O94766 335 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 DIRAS1O95057 198 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SLC25A14O95258 325 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 CPSF4O95639 269 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 GUCA1CO95843 209 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 LALBAP00709 142 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 RHOCP08134 193 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 HBQ1P09105 142 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PIRTP0C851 137 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF883P0CG24 379 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 RRASP10301 218 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 F3P13726 295 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 UGT2B7P16662 529 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ATF6P18850 670 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZP3P21754 424 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 UQCRC2P22695 453 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 HOXD10P28358 340 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SLC6A1P30531 599 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TIA1P31483 386 aaKnown RBP eCLIP2.26□□□□□ -2.05
VPS41-206ENST00000418457 IFNGR2P38484 337 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SPAM1P38567 509 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NSG1P42857 185 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CRATP43155 626 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TSFMP43897 325 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 BRCC3P46736 316 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CDX1P47902 265 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 RFX3P48380 749 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CSNK1DP48730 415 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 EVX1P49640 407 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms