RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNF32P17041 273 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 APEX1P27695 318 aaKnown RBP13.18□□□□□ -0.3
NUP50-204ENST00000417702 NR4A2P43354 598 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 OMPP47874 163 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 PCBD1P61457 104 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 SPIBQ01892 262 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 GGTLC2Q14390 218 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 IQCCQ4KMZ1 466 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 ALDH16A1Q8IZ83 802 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 PAQR4Q8N4S7 273 aaPredicted RBP13.18□□□□□ -0.3
NUP50-204ENST00000417702 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
NUP50-204ENST00000417702 DHRS1Q96LJ7 313 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 Q96M85 177 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 BCL2L14Q9BZR8 327 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 GPR160Q9UJ42 338 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 FZR1Q9UM11 496 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 PRPF19Q9UMS4 504 aaKnown RBP13.18□□□□□ -0.3
NUP50-204ENST00000417702 ADAM18Q9Y3Q7 739 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 H7C1C5 153 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 PTP4A3O75365 173 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 GADD45GO95257 159 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 FABP3P05413 133 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 CST2P09228 141 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 ZNF26P17031 533 aaPredicted RBP13.17□□□□□ -0.3
NUP50-204ENST00000417702 MSR1P21757 451 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 CCNOP22674 350 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 STOMP27105 288 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 LAP3P28838 519 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 LIMS1P48059 325 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 UCP2P55851 309 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 LCN6P62502 163 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 SEC23BQ15437 767 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 UNQ6126/PRO20091Q6UXV3 157 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
NUP50-204ENST00000417702 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 OR51B6Q9H340 312 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 EIF3KQ9UBQ5 218 aaKnown RBP13.17□□□□□ -0.3
NUP50-204ENST00000417702 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 TIMM10BQ9Y5J6 103 aa13.17□□□□□ -0.3
NUP50-204ENST00000417702 PRSS37A4D1T9 235 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 C12orf71A8MTZ7 269 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
NUP50-204ENST00000417702 CRLF1O75462 422 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 STAMBPO95630 424 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 SEMG1P04279 462 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 SDHAP31040 664 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 IFNGR2P38484 337 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 ALDH3B1P43353 468 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
NUP50-204ENST00000417702 PSG4Q00888 419 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
NUP50-204ENST00000417702 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 MESTQ5EB52 335 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 DPY19L2P2Q6ZN68 376 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 FAM122BQ7Z309 247 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 LRP11Q86VZ4 500 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 ZNF786Q8N393 782 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 AKR7LQ8NHP1 331 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 SYNPRQ8TBG9 265 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
NUP50-204ENST00000417702 OR2H1Q9GZK4 316 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 MUC13Q9H3R2 512 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 IL1RAPQ9NPH3 570 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 POLE4Q9NR33 117 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 TMCC3Q9ULS5 477 aa13.16□□□□□ -0.3
NUP50-204ENST00000417702 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 GYG2O15488 501 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
NUP50-204ENST00000417702 APEHP13798 732 aaKnown RBP13.15□□□□□ -0.3
NUP50-204ENST00000417702 GZMKP49863 264 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.3
NUP50-204ENST00000417702 MAD2L1BPQ15013 274 aaPredicted RBP13.15□□□□□ -0.3
NUP50-204ENST00000417702 MOGQ16653 247 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 SNX33Q8WV41 574 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 RASD2Q96D21 266 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 FUZQ9BT04 418 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 WACQ9BTA9 647 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 SLCO1C1Q9NYB5 712 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
NUP50-204ENST00000417702 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
NUP50-204ENST00000417702 OR10H3O60404 316 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms