RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 DAG1Q14118 895 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 MFSD13AQ14CX5 517 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 RCN1Q15293 331 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 ALKBH6Q3KRA9 238 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 FAM69AQ5T7M9 428 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 C1orf94Q6P1W5 598 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 SHQ1Q6PI26 577 aaKnown RBP11.07□□□□□ -0.64
LINC00339-202ENST00000416769 TMPRSS11FQ6ZWK6 438 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 NRMQ8IXM6 262 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 TMEM123Q8N131 208 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 PFN4Q8NHR9 129 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF417Q8TAU3 575 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 GNPDA2Q8TDQ7 276 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 LIPHQ8WWY8 451 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 SGTBQ96EQ0 304 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF75AQ96N20 296 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 OR2M2Q96R28 347 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF587Q96SQ5 575 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-202ENST00000416769 EMC6Q9BV81 110 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 SEMA6AQ9H2E6 1030 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 KRCC1Q9NPI7 259 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF224Q9NZL3 707 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 RASD1Q9Y272 281 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
LINC00339-202ENST00000416769 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 G3V2T6 193 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 RPL36A-HNRNPH2H7BZ11 118 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 MT-ATP6P00846 226 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 BGLAPP02818 100 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 PATE4P0C8F1 98 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 IFI30P13284 250 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 ANXA8P13928 327 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 FUT1P19526 365 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 NR4A1P22736 598 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 RBMXP38159 391 aaKnown RBP11.06□□□□□ -0.64
LINC00339-202ENST00000416769 OMPP47874 163 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 ACTG1P63261 375 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF770Q6IQ21 691 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-202ENST00000416769 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 ZDHHC13Q8IUH4 622 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 OR10G2Q8NGC3 310 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 FGFBP3Q8TAT2 258 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 MRPL24Q96A35 216 aaKnown RBP11.06□□□□□ -0.64
LINC00339-202ENST00000416769 TMEM186Q96B77 213 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 BPIFA2Q96DR5 249 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 TXNDC15Q96J42 360 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 OSBPL10Q9BXB5 764 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 RACGAP1Q9H0H5 632 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 B3GNT2Q9NY97 397 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-202ENST00000416769 REV1Q9UBZ9 1251 aa11.06□□□□□ -0.64
LINC00339-202ENST00000416769 LRRN3E7EW58 273 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 KPNA4O00629 521 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-202ENST00000416769 PIP5K1CO60331 668 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 SLC43A1O75387 559 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 OR7A10O76100 309 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 CH25HO95992 272 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 GASTP01350 101 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 SAGP10523 405 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-202ENST00000416769 NAT2P11245 290 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 CD79AP11912 226 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 B4GALT1P15291 398 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF43P17038 809 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 GRPRP30550 384 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF74Q16587 644 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ANKDD1AQ495B1 522 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 C1QTNF12Q5T7M4 302 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 GPR137CQ8N3F9 429 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
LINC00339-202ENST00000416769 TSPAN32Q96QS1 320 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 C9orf16Q9BUW7 83 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 DGCR6LQ9BY27 220 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 NANSQ9NR45 359 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF275Q9NSD4 429 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-202ENST00000416769 MED29Q9NX70 200 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF229Q9UJW7 825 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 RCE1Q9Y256 329 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 SPEF1Q9Y4P9 236 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 CORINQ9Y5Q5 1042 aa11.05□□□□□ -0.64
LINC00339-202ENST00000416769 B4DSR2 109 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 M0R233 179 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 RP2O75695 350 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 VAMP5O95183 116 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 MSMBP08118 114 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ASAH2BP0C7U1 165 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 GAAP10253 952 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF35P13682 527 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-202ENST00000416769 ADRA2CP18825 462 aa11.04□□□□□ -0.64
LINC00339-202ENST00000416769 MAKP20794 623 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms