RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 AASSQ9UDR5 926 aa17.82■□□□□ 0.44
PTPRU-203ENST00000415600 SLC7A7Q9UM01 511 aa17.82■□□□□ 0.44
PTPRU-203ENST00000415600 NOX1Q9Y5S8 564 aa17.82■□□□□ 0.44
PTPRU-203ENST00000415600 SONP18583 2426 aaKnown RBP17.81■□□□□ 0.44
PTPRU-203ENST00000415600 ALPK2Q86TB3 2170 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 A0A096LPE4 126 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 A0A0B4J2E0 115 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 IGHV1-18A0A0C4DH31 117 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 A0A1B0GX12 115 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 A0A1W2PPZ6 126 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 XPNPEP2O43895 674 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 MPZL2O60487 215 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 ZNF432O94892 652 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 LYPD3O95274 346 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 HTR1AP08908 422 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 JUNBP17275 347 aaPredicted RBP17.81■□□□□ 0.44
PTPRU-203ENST00000415600 SERPINF1P36955 418 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 TSPAN31Q12999 210 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 KCTD8Q6ZWB6 473 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 IL17RDQ8NFM7 739 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 OR10H5Q8NGA6 315 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 GPA33Q99795 319 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 TMEM43Q9BTV4 400 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 CRLF2Q9HC73 371 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 YAE1D1Q9NRH1 226 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 PLCXD1Q9NUJ7 323 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 PAK1IP1Q9NWT1 392 aaPredicted RBP17.81■□□□□ 0.44
PTPRU-203ENST00000415600 IMPAD1Q9NX62 359 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 B3GAT1Q9P2W7 334 aa17.81■□□□□ 0.44
PTPRU-203ENST00000415600 CRNNQ9UBG3 495 aaPredicted RBP17.81■□□□□ 0.44
PTPRU-203ENST00000415600 B9A039 149 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 MRPS14O60783 128 aaKnown RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 FAM20BO75063 409 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 SOX14O95416 240 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 MT-ATP6P00846 226 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 ERCC1P07992 297 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 POU1F1P28069 291 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 ARR3P36575 388 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 SLC35A2P78381 396 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 ARF1P84077 181 aaKnown RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 LGALS3BPQ08380 585 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 PMS2P3Q13401 168 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 TMEM236Q5W0B7 351 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 C12orf73Q69YU5 71 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 SLC46A3Q7Z3Q1 461 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 SPARTQ8N0X7 666 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 TMEM255BQ8WV15 326 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 SGCDQ92629 289 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 GPR35Q9HC97 309 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 VCX3AQ9NNX9 186 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 MYOZ1Q9NP98 299 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 CCNB1IP1Q9NPC3 277 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 KRCC1Q9NPI7 259 aaPredicted RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 CA10Q9NS85 328 aa17.8■□□□□ 0.44
PTPRU-203ENST00000415600 MRPL39Q9NYK5 338 aaKnown RBP17.8■□□□□ 0.44
PTPRU-203ENST00000415600 IGKV1D-42A0A075B6H8 117 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 IGHV4-30-2A0A087WSY4 118 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 ZNF726A6NNF4 738 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 H3BN98 237 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 F12P00748 615 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 IFNA2P01563 188 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 CBR1P16152 277 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 FPR3P25089 353 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 CAPZA2P47755 286 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 NAAAQ02083 359 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 PUDPQ08623 228 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 SMN1Q16637 294 aaKnown RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 RASSF6Q6ZTQ3 369 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 RNF113BQ8IZP6 322 aaKnown RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 IPCEF1Q8WWN9 437 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 DGCR14Q96DF8 476 aaKnown RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 OR2M2Q96R28 347 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 ZNF99A8MXY4 864 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 OR6A2O95222 327 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 IGFBP1P08833 259 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 KRTAP1-1Q07627 177 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 LOXL1Q08397 574 aaPredicted RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 CEACAM16Q2WEN9 425 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 ZBED5Q49AG3 693 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 GPR141Q7Z602 305 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 NRMQ8IXM6 262 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 ZNF525Q8N782 197 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 NANOS1Q8WY41 292 aaKnown RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 TMIGD2Q96BF3 282 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 FAM46AQ96IP4 442 aaKnown RBP17.79■□□□□ 0.44
PTPRU-203ENST00000415600 LRR1Q96L50 414 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 TNFRSF13CQ96RJ3 184 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 SLC25A19Q9HC21 320 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 SNX5Q9Y5X3 404 aa17.79■□□□□ 0.44
PTPRU-203ENST00000415600 A8MV72 311 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-203ENST00000415600 PTGES3LE9PB15 166 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 NDUFS8O00217 210 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 CHP2O43745 196 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 IGKV3-15P01624 115 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 IGLV1-44P01699 117 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 CECR9P0C854 216 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 PDLIM4P50479 330 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 POU3F1Q03052 451 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-203ENST00000415600 SWI5Q1ZZU3 235 aa17.78■□□□□ 0.44
PTPRU-203ENST00000415600 LINGO2Q7L985 606 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms