RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MOGAT2Q3SYC2 334 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PPP1R2P3Q6NXS1 205 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ALKAL1Q6UXT8 129 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TUBA1AQ71U36 451 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF677Q86XU0 584 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CMTM8Q8IZV2 173 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 OR7G2Q8NG99 324 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 C11orf45Q8TAV5 145 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TRUB1Q8WWH5 349 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF641Q96N77 438 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 SLC30A2Q9BRI3 323 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SYT11Q9BT88 431 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 RAB11FIP5Q9BXF6 653 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 C1QTNF4Q9BXJ3 329 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ASB7Q9H672 318 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CLEC5AQ9NY25 188 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ARMCX1Q9P291 453 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 NPTNQ9Y639 398 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 KIF26BQ2KJY2 2108 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SPEGQ15772 3267 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KIR2DL5BA0A0G2JN68 375 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KIR2DL5BA0A0G2JPC4 375 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 A0A1B0GUA9 196 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 A0A1W2PPV4 95 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CD8B2A6NJW9 211 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 NPIPB9F8W1W9 429 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SLC9A3R1O14745 358 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 RAB29O14966 203 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TSPAN2O60636 221 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LATS1O95835 1130 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LIFP15018 202 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PMCHP20382 165 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KITLGP21583 273 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CDH5P33151 784 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 CRATP43155 626 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C21orf59P57076 290 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 RGS8P57771 180 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 ZNF658BQ4V348 819 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 VAX1Q5SQQ9 334 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FAM71F2Q6NXP2 309 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LEG1Q6P5S2 330 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ENPP6Q6UWR7 440 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TMEM107Q6UX40 140 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 Q6ZN92 141 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 OR4N5Q8IXE1 308 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CMTM1Q8IZ96 169 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KIR2DL5AQ8N109 375 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MARVELD2Q8N4S9 558 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SYT14Q8NB59 555 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 OR4D9Q8NGE8 314 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 OR10V1Q8NGI7 309 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KIR2DL5BQ8NHK3 375 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ZNF519Q8TB69 540 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ACP6Q9NPH0 428 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SCRT2Q9NQ03 307 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 NUDT4Q9NZJ9 180 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MYEF2Q9P2K5 600 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 HMGXB4Q9UGU5 601 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MRM2Q9UI43 246 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 ICAM5Q9UMF0 924 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 AUP1Q9Y679 476 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FBN2P35556 2912 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SHANK1Q9Y566 2161 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TCRBV9S1A1TA0A576 114 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PSMD11O00231 422 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 IGHV4-39P01824 125 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 APODP05090 189 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ERCC1P07992 297 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 SERPINA6P08185 405 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 RD3LP0DJH9 198 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TGM4P49221 684 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 IST1P53990 364 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SLC7A9P82251 487 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C2orf54Q08AI8 447 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TWF1Q12792 350 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KLRB1Q12918 225 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 IL18Q14116 193 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MESDQ14696 234 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ABRAXAS2Q15018 415 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C3P1Q6ZMU1 363 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PGAP1Q75T13 922 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ZNF575Q86XF7 245 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TRAM1L1Q8N609 369 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 KIR3DL3Q8N743 410 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 UBL4BQ8N7F7 174 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ZFP41Q8N8Y5 198 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 OR52H1Q8NGJ2 320 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 HPSE2Q8WWQ2 592 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MYLPFQ96A32 169 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CIDECQ96AQ7 238 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 FAF2Q96CS3 445 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CMTM7Q96FZ5 175 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SERAC1Q96JX3 654 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 GOLPH3Q9H4A6 298 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 GLIPR2Q9H4G4 154 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ELOVL6Q9H5J4 265 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CISHQ9NSE2 258 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 ZNF446Q9NWS9 450 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms