RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GKN3PP0CG01 181 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 S100A3P33764 101 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 MPV17P39210 176 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 COPZ1P61923 177 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 GNA13Q14344 377 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ZMAT1Q5H9K5 638 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 COX20Q5RI15 118 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 SPATA46Q5T0L3 261 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ANXA8L1Q5VT79 327 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ZNF440Q8IYI8 595 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 GALNT4Q8N4A0 578 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 COQ8BQ96D53 544 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-208ENST00000414711 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 B9D2Q9BPU9 175 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 PCGF1Q9BSM1 259 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 DUSP26Q9BV47 211 aa13.11□□□□□ -0.31
CPNE1-208ENST00000414711 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-208ENST00000414711 MGRN1O60291 552 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 FZD7O75084 574 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 CPT2P23786 658 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 IL12AP29459 219 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 LIPAP38571 399 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 GABPB1Q06547 395 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-208ENST00000414711 LRRC74AQ0VAA2 488 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 PIWIL3Q7Z3Z3 882 aaKnown RBP13.1□□□□□ -0.31
CPNE1-208ENST00000414711 KLBQ86Z14 1044 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 UEVLDQ8IX04 471 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 CLECL1Q8IZS7 167 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 OR8J2Q8NGG1 315 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 OR9I1Q8NGQ6 314 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 CFHR4Q92496 578 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 TRIM15Q9C019 465 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 DPAGT1Q9H3H5 408 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 TMEM165Q9HC07 324 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 MSL2Q9HCI7 577 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
CPNE1-208ENST00000414711 LOC102725191A0A1B0GVB3 256 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 CCDC154A6NI56 674 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 IL7RP16871 459 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 RPS4Y1P22090 263 aaKnown RBP13.09□□□□□ -0.31
CPNE1-208ENST00000414711 EGR4Q05215 589 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SPANXN4Q5MJ08 99 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 THEM4Q5T1C6 240 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 FUNDC1Q8IVP5 155 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SLC22A24Q8N4F4 322 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 CMTM5Q96DZ9 223 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SPDL1Q96EA4 605 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SLC19A3Q9BZV2 496 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 RMND5AQ9H871 391 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 RNF121Q9H920 327 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 A4GALTQ9NPC4 353 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 RLIMQ9NVW2 624 aa13.09□□□□□ -0.31
CPNE1-208ENST00000414711 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 PRSS51A0A1B0GVH4 220 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 ANGPT2O15123 496 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 ENTPD5O75356 428 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 PTHP01270 115 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 PRDX6P30041 224 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 GABRA5P31644 462 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 CFHR2P36980 270 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
CPNE1-208ENST00000414711 CYLC2Q14093 348 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-208ENST00000414711 MBNL2Q5VZF2 373 aaKnown RBP13.08□□□□□ -0.32
CPNE1-208ENST00000414711 OR4F3Q6IEY1 312 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 H1FNTQ75WM6 255 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-208ENST00000414711 TRPM8Q7Z2W7 1104 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 RP9Q8TA86 221 aaKnown RBP13.08□□□□□ -0.32
CPNE1-208ENST00000414711 OR52E6Q96RD3 313 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 PRDM4Q9UKN5 801 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 FOXJ3Q9UPW0 622 aa13.08□□□□□ -0.32
CPNE1-208ENST00000414711 IQCMA0A1B0GVH7 501 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 CDHR4A6H8M9 788 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 BBIP1A8MTZ0 92 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 P2RY10O00398 339 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
CPNE1-208ENST00000414711 HPRP00739 348 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 COX4I1P13073 169 aa13.07□□□□□ -0.32
CPNE1-208ENST00000414711 TNFRSF1AP19438 455 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms