RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 GLB1L2Q8IW92 636 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 CLDN22Q8N7P3 220 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 BDH2Q9BUT1 245 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 CACNG6Q9BXT2 260 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 DGCR6LQ9BY27 220 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 NOX3Q9HBY0 568 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 IL20Q9NYY1 176 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 ZNF224Q9NZL3 707 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 VSX1Q9NZR4 365 aaPredicted RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 EIF3KQ9UBQ5 218 aaKnown RBP12.75□□□□□ -0.37
CHD1-202ENST00000414220 UGT2A1Q9Y4X1 527 aa12.75□□□□□ -0.37
CHD1-202ENST00000414220 PRR14LQ5THK1 2151 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 DSCAMO60469 2012 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 IFNGP01579 166 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 OR4A8P0C604 315 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 ZNF35P13682 527 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 ANXA8P13928 327 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 ZNF32P17041 273 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 GLRXP35754 106 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 CDKN1AP38936 164 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
CHD1-202ENST00000414220 FXYD6P3P58550 94 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 PABPC1L2AQ5JQF8 200 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 CLEC12AQ5QGZ9 265 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 ARL9Q6T311 187 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 C10orf67Q8IYJ2 551 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 C1orf174Q8IYL3 243 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 OR2T33Q8NG76 320 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 TEX47Q8TBZ9 253 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 MS4A3Q96HJ5 214 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 TSSK6Q9BXA6 273 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 NUAK2Q9H093 628 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 PLK3Q9H4B4 646 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 EGLN3Q9H6Z9 239 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 POLE4Q9NR33 117 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 PDP1Q9P0J1 537 aaPredicted RBP12.74□□□□□ -0.37
CHD1-202ENST00000414220 CCDC168Q8NDH2 2452 aa12.74□□□□□ -0.37
CHD1-202ENST00000414220 IGKV1D-43A0A0B4J1Z2 117 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 H3BN98 237 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 CD8AP01732 235 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 MMP7P09237 267 aaPredicted RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 FCGR1AP12314 374 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 CTLA4P16410 223 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 CCNOP22674 350 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 STOMP27105 288 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 THBS4P35443 961 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 CDKN2AP42771 156 aaKnown RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 HGFACQ04756 655 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 GLO1Q04760 184 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 EFNB3Q15768 340 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 SLC36A3Q495N2 470 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 ZNF770Q6IQ21 691 aaPredicted RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 PAPD5Q8NDF8 572 aaKnown RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 OR10H5Q8NGA6 315 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 OR52E2Q8NGJ4 325 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 OR4K13Q8NH42 304 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 FGFBP3Q8TAT2 258 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 ZNF75AQ96N20 296 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 FEVQ99581 238 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 SRA1Q9HD15 236 aaKnown RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 GPR160Q9UJ42 338 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 KLHL21Q9UJP4 597 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 COA3Q9Y2R0 106 aaPredicted RBP12.73□□□□□ -0.37
CHD1-202ENST00000414220 POLR1DQ9Y2S0 133 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 FKBP7Q9Y680 259 aa12.73□□□□□ -0.37
CHD1-202ENST00000414220 H7C417 338 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 SNAP29O95721 258 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 FOSL1P15407 271 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 HIST1H1CP16403 213 aaKnown RBP12.72□□□□□ -0.37
CHD1-202ENST00000414220 PCSK6P29122 969 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 NUDT6P53370 316 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 DSCR9P59020 149 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD1-202ENST00000414220 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 MOGQ16653 247 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 RGS7BPQ6MZT1 257 aaPredicted RBP12.72□□□□□ -0.37
CHD1-202ENST00000414220 CD300LDQ6UXZ3 194 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
CHD1-202ENST00000414220 LURAP1LQ8IV03 231 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 WFDC11Q8NEX6 87 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 DNAJC9Q8WXX5 260 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 C11orf40Q8WZ69 217 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 HTRA1Q92743 480 aa12.72□□□□□ -0.37
CHD1-202ENST00000414220 Q96MF0 132 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms