RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 AVPR1BP47901 424 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 CXCL12P48061 93 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 XKP51811 444 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 ATP5J2P56134 94 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 CPTPQ5TA50 214 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 KIAA0895LQ68EN5 471 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF770Q6IQ21 691 aaPredicted RBP8.49□□□□□ -1.05
SNHG3-201ENST00000413987 TEX38Q6PEX7 206 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 C3P1Q6ZMU1 363 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 RASSF6Q6ZTQ3 369 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 CHMP1BQ7LBR1 199 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 GCNT2Q8N0V5 402 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 OR8D4Q8NGM9 314 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 OR5AR1Q8NGP9 310 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 OR2L2Q8NH16 312 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 SCARB1Q8WTV0 552 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 MAL2Q969L2 176 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 WBP1Q96G27 269 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 HSPA12BQ96MM6 686 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 IL17FQ96PD4 163 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 POLDIP3Q9BY77 421 aaKnown RBP8.49□□□□□ -1.05
SNHG3-201ENST00000413987 TMEM38AQ9H6F2 299 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 MCCC2Q9HCC0 563 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 FGF20Q9NP95 211 aaPredicted RBP8.49□□□□□ -1.05
SNHG3-201ENST00000413987 DLL4Q9NR61 685 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 MRPS18AQ9NVS2 196 aaKnown RBP8.49□□□□□ -1.05
SNHG3-201ENST00000413987 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 UPB1Q9UBR1 384 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 SLC5A6Q9Y289 635 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 SPAG17Q6Q759 2223 aa8.49□□□□□ -1.05
SNHG3-201ENST00000413987 C2orf74A8MZ97 194 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ACOT7O00154 380 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 GMDSO60547 372 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 C1QCP02747 245 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 OPN1SWP03999 348 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 IFNW1P05000 195 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CBSLP0DN79 551 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF28P17035 718 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TNFRSF1BP20333 461 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 RBMS1P29558 406 aaKnown RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SSTR2P30874 369 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CBSP35520 551 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 RFX3P48380 749 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CTBP2P56545 445 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FUT7Q11130 342 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 RAB40BQ12829 278 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF630Q2M218 657 aaPredicted RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 MST1LQ2TV78 715 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FRG2Q64ET8 278 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TRIM40Q6P9F5 258 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 LRRC28Q86X40 367 aaPredicted RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 KMT5CQ86Y97 462 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TCEANCQ8N8B7 351 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CPEB3Q8NE35 698 aaKnown RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 OR52N2Q8NGI0 321 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FOPNLQ96NB1 174 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SLC38A2Q96QD8 506 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FRG2BQ96QU4 278 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 H2AFJQ9BTM1 129 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SLCO5A1Q9H2Y9 848 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 RERGLQ9H628 205 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 LYRM4Q9HD34 91 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 IMP3Q9NV31 184 aaKnown RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TESQ9UGI8 421 aaKnown RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 POMT2Q9UKY4 750 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 COPS3Q9UNS2 423 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SLC17A4Q9Y2C5 497 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 NPTNQ9Y639 398 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 H3BN98 237 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FAAHO00519 579 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SLC25A12O75746 678 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 BRI3O95415 125 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 TCRBP04435 133 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 WNT1P04628 370 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 LAMP1P11279 417 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 IGFBP2P18065 325 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CAPZBP47756 277 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 MVDP53602 400 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SMIM11AP58511 58 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CTXN1P60606 82 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 PFN3P60673 137 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 FABP5Q01469 135 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ID3Q02535 119 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 OPCMLQ14982 345 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 PAQR6Q6TCH4 344 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ASB18Q6ZVZ8 466 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 OR5M3Q8NGP4 307 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 MED8Q96G25 268 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 OR4K3Q96R72 315 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 CYSLTR2Q9NS75 346 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 STOX2Q9P2F5 926 aaPredicted RBP8.48□□□□□ -1.05
SNHG3-201ENST00000413987 ANGPT4Q9Y264 503 aa8.48□□□□□ -1.05
SNHG3-201ENST00000413987 SLC22A23A1A5C7 686 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 C10orf142B7Z368 130 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 GFYI3L273 518 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 RNASET2O00584 256 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms