RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TIMD4Q96H15 378 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 COQ2Q96H96 371 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CEP170P1Q96L14 293 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 FCRL1Q96LA6 429 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 PARD6BQ9BYG5 372 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 TSGA10Q9BZW7 698 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 NEUROG2Q9H2A3 272 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CXCL16Q9H2A7 254 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 REEP4Q9H6H4 257 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 EML4Q9HC35 981 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 CGNQ9P2M7 1197 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 HMGXB4Q9UGU5 601 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 NUFIP1Q9UHK0 495 aaKnown RBP2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 MEMO1Q9Y316 297 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 HYOU1Q9Y4L1 999 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 KIAA1549LQ6ZVL6 1849 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 MROH7Q68CQ1 1323 aa2.37□□□□□ -2.03
HMGB1P11-201ENST00000413899 COL1A2P08123 1366 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 A0A0G2JN53 185 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 METTL21EPA6NDL7 271 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 A6NDX4 124 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 HAS3O00219 553 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 PES1O00541 588 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MAGEB3O15480 346 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MBTPS2O43462 519 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAD51CO43502 376 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SCGNO76038 276 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RHOBTB1O94844 696 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SLC25A27O95847 323 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ASS1P00966 412 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 HLA-DRAP01903 254 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 KLK3P07288 261 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TPM1P09493 284 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CLTAP09496 248 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RHOXF2BP0C7M4 288 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF286BP0CG31 522 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 HSMCR30P0CW71 290 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TDGF1P13385 188 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF44P15621 663 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCNCP24863 283 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MAGEA1P43355 309 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TDGF1P3P51864 188 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SNRPFP62306 86 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 IRX3P78415 501 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MRPS25P82663 173 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 OGDHQ02218 1023 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ATP6AP1Q15904 470 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 UAP1Q16222 522 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SFT2D3Q587I9 215 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TMEM255AQ5JRV8 349 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MARCH8Q5T0T0 291 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CST9Q5W186 159 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 OR52E8Q6IFG1 317 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CDR2LQ86X02 465 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CEP112Q8N8E3 955 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 Q8N9W7 124 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MNS1Q8NEH6 495 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TRPV1Q8NER1 839 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SPATA4Q8NEY3 305 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 NDRG1Q92597 394 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ARPC1AQ92747 370 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 KIFAP3Q92845 792 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 FGF11Q92914 225 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 UBE2E3Q969T4 207 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 DCPSQ96C86 337 aaKnown RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RNF185Q96GF1 192 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 CAPZA3Q96KX2 299 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RHOXF2Q9BQY4 288 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ERP44Q9BS26 406 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 RBKSQ9H477 322 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 ZNF302Q9NR11 478 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 BLOC1S6Q9UL45 172 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 HPCAL4Q9UM19 191 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 SAR1BQ9Y6B6 198 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 TET1Q8NFU7 2136 aa2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 MUC22E2RYF6 1773 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P11-201ENST00000413899 IGLV3-16A0A075B6K0 115 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCL15-CCL14A0A0B4J2E2 113 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CTAGE15A4D2H0 777 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 LRRIQ4A6NIV6 560 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCDC169A6NNP5 214 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 NBR2O15453 112 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RAMP3O60896 148 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 MOSP00540 346 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 IGKV3-11P04433 115 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CXCL8P10145 99 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 TCP1P17987 556 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 IL12AP29459 219 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 GTF2H1P32780 548 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 GRIA1P42261 906 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 VDAC2P45880 294 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 ACOT2P49753 483 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 PPOXP50336 477 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 LAMTOR4Q0VGL1 99 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CUL2Q13617 745 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CASP8Q14790 479 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 SPA17Q15506 151 aa2.35□□□□□ -2.03
HMGB1P11-201ENST00000413899 CCL15Q16663 113 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms