RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 LDLRAD3Q86YD5 345 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 BPIFB2Q8N4F0 458 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 EID2Q8N6I1 236 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 C4orf45Q96LM5 186 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
SEMA3F-202ENST00000413852 WIPF3A6NGB9 483 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 F5H0A9 414 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 DCNP07585 359 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 VAMP1P23763 118 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 CD34P28906 385 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 SLC35D3Q5M8T2 416 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 DNM1P46Q6ZS02 220 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 SFXN1Q9H9B4 322 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 DISC1C4P0D8 188 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 EIF1AYO14602 144 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 ABCD4O14678 606 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 OR2T1O43869 369 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 ITGB2P05107 769 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 HNRNPA1P09651 372 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 AKR1C4P17516 323 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 CNR1P21554 472 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 NFYBP25208 207 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 SDHAP31040 664 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 MRPS10P82664 201 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 TMEM196Q5HYL7 178 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 TMEM71Q6P5X7 295 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 ZNF595Q8IYB9 648 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 NUDCD2Q8WVJ2 157 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 SPACA5Q96QH8 159 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 CST11Q9H112 138 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 ESRP2Q9H6T0 727 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 MMP25Q9NPA2 562 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 TMEM184BQ9Y519 407 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 MED12Q93074 2177 aa13.15□□□□□ -0.3
SEMA3F-202ENST00000413852 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 NPIPB9F8W1W9 429 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC35E2P0CK97 266 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 TACR3P29371 465 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 KIR2DS3Q14952 304 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF563Q8TA94 476 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 BAHD1Q8TBE0 780 aaPredicted RBP13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 MCHR2Q969V1 340 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 INTS14Q96SY0 518 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 FAM96BQ9Y3D0 163 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 HEBP2Q9Y5Z4 205 aa13.15□□□□□ -0.31
SEMA3F-202ENST00000413852 HPGDP15428 266 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 PI3P19957 117 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF10P21506 573 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 LINC00346Q8IVM7 164 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF417Q8TAU3 575 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 GPX8Q8TED1 209 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 Q9N2J8 555 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 TMEM200CA6NKL6 621 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC16A7O60669 478 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 NUDT14O95848 222 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 ACTL6AO96019 429 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 CD1AP06126 327 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 MGMTP16455 207 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 CAPZA2P47755 286 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 EIF2B5Q13144 721 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 RAB12Q6IQ22 244 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 MRGPRFQ96AM1 343 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 SLC22A18Q96BI1 424 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 ADOQ96SZ5 270 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 SELENOIQ9C0D9 397 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
SEMA3F-202ENST00000413852 VPS13AQ96RL7 3174 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 KIF26BQ2KJY2 2108 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 A0A0B4J2A0 478 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PLRG1O43660 514 aaKnown RBP13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 AQP8O94778 261 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ADH1BP00325 375 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 AK1P00568 194 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ZNF735P0CB33 412 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 RAB3AP20336 220 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 CXADRP78310 365 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 ALG11Q2TAA5 492 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
SEMA3F-202ENST00000413852 GLT8D1Q68CQ7 371 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms