RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 OR4A47Q6IF82 309 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 LYPD4Q6UWN0 246 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 LINGO4Q6UY18 593 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 HIST2H3AQ71DI3 136 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 GLT6D1Q7Z4J2 308 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 CD163Q86VB7 1156 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 ATXN7L3BQ96GX2 97 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 REEP6Q96HR9 211 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 OR6C1Q96RD1 312 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 FSD1LQ9BXM9 530 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 CACNG6Q9BXT2 260 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 OR8D2Q9GZM6 311 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 FXYD6Q9H0Q3 95 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 CLMPQ9H6B4 373 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 BEX1Q9HBH7 125 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 NGBQ9NPG2 151 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 CLEC4EQ9ULY5 219 aa4.75□□□□□ -1.65
HERC4-205ENST00000412272 A0A087WZ62 844 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 IRGMA1A4Y4 181 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PRR33A8MZF0 331 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SHISA8B8ZZ34 492 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ALOX12BO75342 701 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 GJA5P36382 358 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CXCR3P49682 368 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SULT1A1P50225 295 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RHOGP84095 191 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 IL10RAQ13651 578 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CBFBQ13951 182 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PLPPR5Q32ZL2 321 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 FAM102AQ5T9C2 384 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 ABHD17BQ5VST6 288 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 WDR5BQ86VZ2 330 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ZNF485Q8NCK3 441 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 STEAP2Q8NFT2 490 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RPLP0P6Q8NHW5 317 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RLN3Q8WXF3 142 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR8D1Q8WZ84 308 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 FGF11Q92914 225 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 TECTBQ96PL2 329 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MIEN1Q9BRT3 115 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RAB11FIP5Q9BXF6 653 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 VCX2Q9H322 139 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 IGFLR1Q9H665 355 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 REEP1Q9H902 201 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 YAE1D1Q9NRH1 226 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 GPATCH2LQ9NWQ4 482 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CLN6Q9NWW5 311 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MTCH1Q9NZJ7 389 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PRG3Q9Y2Y8 225 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 CCL27Q9Y4X3 112 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 COX11Q9Y6N1 276 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CHD3Q12873 2000 aaKnown RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 COL5A2P05997 1499 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 IGHV2OR16-5A0A0B4J2B6 119 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 UBE2QL1A1L167 161 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CDHR4A6H8M9 788 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 RNF222A6NCQ9 220 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 NAP1L6A6NFF2 107 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ANKUB1A6NFN9 424 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 FBLL1A6NHQ2 334 aaKnown RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 J3KR12 359 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MFNGO00587 321 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 LAMTOR5O43504 91 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 AVPR1AP37288 418 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 BUD31P41223 144 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 AVPR1BP47901 424 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 H2BFSP57053 126 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 FOXL2P58012 376 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR10A3P58181 314 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 NKX6-1P78426 367 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 RAB31Q13636 194 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ZSWIM7Q19AV6 140 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PLAC9Q5JTB6 97 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 C12orf73Q69YU5 71 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR6V1Q8N148 313 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ABHD5Q8WTS1 349 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SPRYD4Q8WW59 207 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 SFRP2Q96HF1 295 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 CHRNA10Q9GZZ6 450 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MTHFD2LQ9H903 347 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 G6PC2Q9NQR9 355 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 THSD1Q9NS62 852 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SLC23A2Q9UGH3 650 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SLC22A13Q9Y226 551 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PPIAL4AQ9Y536 164 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 WDR90Q96KV7 1748 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 HEPACAM2A8MVW5 462 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 E5RGE8 158 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 PRRG1O14668 218 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 GPR182O15218 404 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MAGEB4O15481 346 aaPredicted RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 WDR1O75083 606 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 VIPP01282 170 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 OR13C7P0DN81 318 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 GOT1P17174 413 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 ADRA1AP35348 466 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 MTNR1BP49286 362 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 EIF5AP63241 154 aaKnown RBP4.74□□□□□ -1.65
HERC4-205ENST00000412272 HBA1P69905 142 aa4.74□□□□□ -1.65
HERC4-205ENST00000412272 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms